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Mutant Lines
54-0173-1

54-0173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 15238183 [Map]; Strand: w
- AT2G36350.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon1 (5UTR)

ATTNTCTTCT NCGCAGGCCT GTAGGCTTAA GGTNTCTTTT GNNANTGTTC 
TTGAGCTCTG TAAGTCACNC TNCTAGAAGC TTATTTGNGC CTNCTAATGC 
TNTNAGGTAC GTCGTTTGCC TCTGAACCTC TTGCTTCNGC ATTCTTCGGA 
CTNNTTGNCT NCTTTTGATG AGATTTGGGG ACTCTTCCTT CAGAAGGATA 
TGAAGATTTT GACATCTTCC ATTAAAAGTN GAATCTTTAC TTAAGCTAGT 
GTTCTTAGCA TTCTGTTTAT GTTAGCTTCA TGAGATC

3 prime edge [+] show sequence

Chromosome: 5; Position: 26426893 [Map]; Strand: w
- AT5G66090.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
  Distance: 0; Region: exon5 (CDS)
- AT5G66100.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
  Distance: -596; Region: promoter

AAGAGGAGGA CGGGGCAGGG GATGAACTCA GCGAGTAGAT TGGCGTCAAT 
GTACTTAGAG TGGATGGCTT CCATGCTCAT CACCACCAGC TCCATCTTCA 
GCTCATCTGC CACCTCTCCT ATTATGGCCG TCGCTTTTTT CCCTTCCCCA 
AGCCTCTCCA ACAGCTTGAA CTCCTCGAAC CCACCTGCAA CCACCACATT 
ATAGTTAACC TTTCTTCAAT AAGGGATTCC AACACTATAG TTTACCTACA 
ATTTCCTACA AGTAATTCCT CAATTTTACC TTCAGACAAA TGCCACCGGA 
TGTTGGATAC TTGAGTCTCA TGCTCCGAAG ATGATTCTCT CTTTTCTTCG 
TCAATGACTG AATCAACAAC GGTGGTCACA GATGATCAAC ACGGCTATAT 
AATTCATATG ATACATAAGG GGATATTAAT GCAACACTAA TTGTTCTTAC 
CTACAACTGT GATATCAGCT CCATACTTCT TTGCCAAGCT GGTTGTTGTA 
GCAGCAGCCT ATCAAATTAA GTGTAATCAG CTTTTTTGTT TGGTGTCAAC 
ATGTTCTCAA AAAGATAACA AGCTAAACAA TAACCTGTCT GGTGCCTTCA 
NAAAGATAAG GATTCCGATC AATCACCCGG CAGGANAANA AGCTTNACAT 
TNCTGAATGC GTCTCCCACT CCCACTGGAC TTGGACTANC TTNTGCTTCT 
TTTGCCTGCN CCNTTNANTN NACCTNANNC TAACCACAAA C

AT2G36350.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: KCBP-interacting protein kinase (TAIR:AT3G52890.2); Has 125358 Blast hits to 88611 proteins in 3507 species: Archae - 46; Bacteria - 15805; Metazoa - 50208; Fungi - 14670; Plants - 20571; Viruses - 390; Other Eukaryotes - 23668 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66090.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66100.1

Model type: Protein coding
Short Description: winged-helix DNA-binding transcription factor family protein
Computational Description: winged-helix DNA-binding transcription factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR