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Mutant Lines
54-0234-1

54-0234-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26439235 [Map]; Strand: c
- AT5G66140.1 - [+] show detail - proteasome alpha subunit D2
  Distance: -471; Region: promoter
- AT5G66150.1 - [+] show detail - Glycosyl hydrolase family 38 protein
  Distance: 0; Region: exon25 (CDS)

CATGTGGAGA GATACTCTAA CATACTAGCT AGCTAGGTGG TGAATGAATC 
CATACTATTT TTGCAGATCA AAGAAGTGAC GGAAATGAGT TTGTCAGCAA 
ATCAAGAGAA AGTAAAGATG AAGGAGAAGA TGAAGTGGAA AGTGGAGGGT 
GAAGCGGAAC AACCTTCTTC CCCGCTAAGA GGCGGACCCG TTGACAAGTC 
GACTTTAGTA GTAGAGCTTG GTCCCATGGA GATTCGTACA TTTGTGGTTC 
AGTTTTATCA GAAACAACGT AGAAGAAGAA AGTTGTTTGT GGGATGATTG 
CGCCAATATG TTTGTACAAT GTTTTAAATC ATTCATTCAT CAACGGTTTG 
GTTAGTTAGA AAGCGCGGGA GGAAGGTTCA TGTATTTTTC AATCGACCAT 
TATACTGTGT TAATGGGCCT GTTATGGAAG TTTTGGGTAT ATAAGGCCCA 
TTTAAAGGAA ATGATGAGTG CGCGATTTGT CTCTCTTCTC AAAAACTTGA 
AGATCTGAGT AGAGTACTTC CTTCTTCTTT TTTTTTTTTT TTTTTTTNNN 
TNNTGGNTTT CCNAAAAAAG NGGNAACTNC NTTTTTNTTT NNTTTCCCCC 
TAAAANAAAA CCNAAANTNT AANNNCGGNN ANAAGAGNGG NNNTTANTNA 
ATANNNATNA TTTNGGTTTT NTCCCCNCNA NGGACCCCCT TTTTTNNANN 
A

AT5G66140.1

Model type: Protein coding
Short Description: proteasome alpha subunit D2
Curator Summary: Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.
Computational Description: proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66150.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family 38 protein
Computational Description: Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR