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Mutant Lines
54-0339-1

54-0339-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26379219 [Map]; Strand: w
- AT5G65940.1 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
  Distance: 0; Region: exon1 (5UTR)
- AT5G65940.2 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
  Distance: 0; Region: exon1 (5UTR)
- AT5G65940.3 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
  Distance: 0; Region: exon1 (5UTR)
- AT5G65950.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -904; Region: promoter

ATCTCGACTG CCATCTTTCT TACTGGTCAG ATTCGCCTTT GTATCTCCGG 
AGAGAGGAGC AGCAATGGGA TCAGAAATTA CCACTAATGG CTAACAAAAT 
CTTCACCCGC TTAGTTTAGG AAGTTGATAT TGGGCCTTAT AGTAATCTGT 
TGGTTTTAAT AATGGGCTTT ATTTTGTTAA TAGAGCAAAT GGAACTTTGC 
TTTTCAAACT CAATTTCAAA GCCCTCTTGC AACATGCTTG ATGAATGAGA 
AGATTATATG TTTTTATCGA GTACGTTAGA CATGTGTTTT TTTTGTTAGG 
AAGCTAGTTT TCCAACTAAC CAACACCTCC CTCTAGCATA AAATGACACG 
TGGGCACCAG ATCAATCATT AAAAAAGTCT TCAAAAATTC TCAACAACCA 
ACTTCTAAAA GTCAGACATG AAAGCCCTCG CCTCTCGATA TATAGATAAT 
TTGCATATAC ATGAAAACTC AACAATCTGA CGCATATGCA ACAGCGTTAA 
TAGATGGAAA GAGCAAGGAA ACGATGGCCG AGTGGAAGAG GAATTAGGCT 
GAGGCAGAAG ACAAAGAGAC TGCGTGCGAG AGTGAGAAGC T

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26379106 [Map]; Strand: w
  - AT5G65940.1 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
    Distance: 0; Region: intron1 (CDS)
  - AT5G65940.2 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
    Distance: 0; Region: intron1 (CDS)
  - AT5G65940.3 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 54-0339-1 - 3-prime edge
```
GTGGTCGANA TGGCCTCTCA GTCTCAGGTC TCTTTCTTGC TTCTTTAATC 
CGAATCTACG ACGATCAATT CTTCGCTCTC TGAATTAATA ATATGATCAC 
AGGTTTTGGT GGAAGAGAAA TCGAGTGTTA GAATCTTGAC ACTAAACAGA 
CCAAAGCAGC TGAATGCTCT GTCCTTCCAC ATGGTTTNNA ATATTTCCCT 
TCTTGTACAT GCGTACTGTA TTGGCTTAGA CTCATTTTTT TCTGTNGA
```

AT5G65940.1

Model type: Protein coding
Short Description: beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary: hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description: beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65940.2

Model type: Protein coding
Short Description: beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary: hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description: beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 31717 Blast hits to 31706 proteins in 2246 species: Archae - 411; Bacteria - 21637; Metazoa - 1269; Fungi - 836; Plants - 624; Viruses - 0; Other Eukaryotes - 6940 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65940.3

Model type: Protein coding
Short Description: beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary: hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description: beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 31609 Blast hits to 31599 proteins in 2217 species: Archae - 411; Bacteria - 21537; Metazoa - 1271; Fungi - 809; Plants - 626; Viruses - 0; Other Eukaryotes - 6955 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65950.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR