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54-0345-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40664 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -475; Region: promoter
    Flanking Genome Sequence: 54-0345-2 - 3-prime edge 
    ATGGGGTACA AAAAAGCAAA GAGTAATCTT CAAGGAATAA TATAATAACA 
    ACACGCATCT ACTAGACCGC ATATATAATA GTAATATCCA TCAAAGCTCT 
    ATTTTATTCT TCAAATTCAC TTATTGTAAG ATAAAAACAT AACGATATTG 
    ATTTATAGTG ACTAGTGAGT GACTANTNNT TNNNTCCGGG TAAATGTATG 
    TGGAAAGGCA CACTTGAACA ACGTAGAAAA TGTCTTTATG ATGTGTAAAA 
    GAGAGCTTAG CTTAACAAAA GTCTTTAGCG GCTGCAATAA CCGTATCCAC 
    GGTGAGTCCN AATTTCCTGT NNAGCACATT GGCTGGTGCA CTTGCTCCAA 
    AACTGTCTAC ACCCGATGGC TTTTCTTTTG GGAGCCAAC

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR