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54-0368-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 534183 [Map]; Strand: c
      • AT4G01270.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 54-0368-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    CCACACCACC TGGTAAATTA GAAGAAAAGG ATGGCTTTAC CATTCAAGGA 
    TCATGCTTAA GGGGAAGAGA AGACTCCTTC GTTAGCAGAA CAGACTCGGT 
    TATAGATGTA GATGATGATT ATGTTCCTGA AACCAACACT TCTGGCATTA 
    GAGATTGGAA TACTAATATT GAAGAGAAAG GTGATAATTC CATGGTGAAG 
    GATATAAAGT TCAACATCAG AAAAGACCCG ACATCATCAG TGTCACCTTA 
    CAGCAATGGT ACTTTTGTTG TACATCATGA ATTCAAGTTC TTGAGTGTAG 
    TAGTAGATTG AAGATTGTCC AATGCAGGTA GTGGAAACAT TTGGCAGTCA 
    AGTGGAACAA ATAGAAACCT TGGTAGATGG AGCAAACATG GAGAGAGAAA 
    CGAAGCAACT CCATCACTAG GAGGTTCTGT TCCAAGAAAA GATGATCTCA 
    TCTCTATTGG ACCTGATGGT AAAGGTGGTA GAATCAAAGT GCTGAGATC

AT4G01270.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink).
Link
InterPro Scan - TAIR