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54-0580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23225297 [Map]; Strand: w
      • AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -789; Region: promoter
    Flanking Genome Sequence: 54-0580-1 - 5-prime edge 
    CTATAAGAGG ATCTATCTCA TTAAACTTGG TGTCAGATAA AAATGATAAT 
    CATGGGATAT TTTGGGAAGG GTTGGATAAT ACCAGTACGG ATGTCGATGA 
    TGGAGAATAT GTACGTTTAA ATATACAAAT TGATAAAAGA ATTTATAGAA 
    AAGGGAATCA TTTGAATTTC TAAAAGTAAT ACAGAAAACA AATCGCCATT 
    TTTTTCTTAC AGACACAAAA GATACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23225181 [Map]; Strand: w
      • AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -905; Region: promoter
    Flanking Genome Sequence: 54-0580-1 - 3-prime edge 
    TCTTATAGCA TATCACTTGT TAGCAGTTTT AACAATTATT AAAAAAAAAA 
    ATTCATGTCT TCAATTTTTC TGTAACATTA TNTGGNNGAT ATTTTCGGAN 
    ATTCTAAAAC CTANATTCAT AGTATATGTT AGTCTAGNGT TGAAATGAAT 
    TTACCTGACA TGNGAATGAA TTATTCGTTA ANACTTTTGA CATTNTTTTG 
    AATNGGTAAC NCCAAATNCG TTTAGGTNGG TAATAAAAAA TTTCGTCCNC 
    AAAAATNTGC CCGTAATGTN TAATTCAAGA CCGATCGTTA ACCGATGAAA 
    ACCCTTANAT TACCTAATAA CAGNGATCTA CAAGTCATGC ATCACTTAAA 
    TAATAATTCC ATGGCCAATG ACAAAGAGGA TC

AT5G57340.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR