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54-0689-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26376927 [Map]; Strand: w
      • AT5G65930.1 - [+] show detail - kinesin-like calmodulin-binding protein (ZWICHEL)
        Distance: -407; Region: promoter
      • AT5G65930.2 - [+] show detail - kinesin-like calmodulin-binding protein (ZWICHEL)
        Distance: -407; Region: promoter
      • AT5G65930.3 - [+] show detail - kinesin-like calmodulin-binding protein (ZWICHEL)
        Distance: -480; Region: promoter
      • AT5G65940.1 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
        Distance: 0; Region: exon14 (CDS)
      • AT5G65940.2 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
        Distance: 0; Region: exon13 (3UTR)
      • AT5G65940.3 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
        Distance: 0; Region: exon14 (CDS)
    Flanking Genome Sequence: 54-0689-1 - 5-prime edge
    CACGAGTCGC CGCCTGAGGA TGCTTTAGAT CATCCTCCCG TTCCACTCTC 
    TCGAAGTACT GCTCCACCAT GCTATCCTTC ATGTCCTCCA GTCGCCTTGG
    CTCCCACTAT AATTTCAGAT ATTGTTATCA ACAATGTCAC ATATTACCAA
    CCACAAATAA CAAATGGAGA GACTTGTTAA ACCTTTGGGT TCTTATCTTT
    GTCTACCAAT ATGGCTCTGC ACCCCTGCAT AAGTAAAGAC ACGCTGTTGT
    AACTACGGTC TACAACAAAG ACGGTTTCAG ATGGAAAAAG CTTGCAAAAC
    CTCCACAAAA TCTTTGCTGA TTTCTCCCTT CATCACATGA CACACCATTC
    TATACTCGCG GATAAGACAC TGCCCCACCC CCTGCAATCG CCCTTCCCTT
    ATCTGAAATA TATACTCACA GTCAGCTCTT TGTCAACATT GCCTGTGATG
    CACATTCTGG GAACTAACCG ATCTAAGAGA GATTTTAAGG CTTGCTGGTG
    AACCCTTCTT CAATGCTTGA ATGGTAGCTG AGATCCAACC ATCTGCTTCT
    TGAGTGGCCT CTCTCTCCTA AGCAACACAT ATNATGGTAG AGTGCGTTGT
    CAAANGTAAA TCANNCNACT CAGGATCGCA AGTCAACATC TCTATATNTA
    ATGAAAGCTT ACAAGTGCAN ATATAATTTC TTCNACTGTC TCCTGGAAAA
    ACCTATAATA CCTC

AT5G65930.1

Model type
Protein coding
Short Description
kinesin-like calmodulin-binding protein (ZWICHEL)
Curator Summary
encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational Description
ZWICHEL (ZWI); FUNCTIONS IN: microtubule motor activity, calmodulin binding; INVOLVED IN: trichome branching, pollen germination; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), FERM, N-terminal (InterPro:IPR018979), Band 4.1 domain (InterPro:IPR019749), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.1); Has 92234 Blast hits to 53602 proteins in 2354 species: Archae - 1118; Bacteria - 10667; Metazoa - 44581; Fungi - 7061; Plants - 5079; Viruses - 192; Other Eukaryotes - 23536 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65930.2

Model type
Protein coding
Short Description
kinesin-like calmodulin-binding protein (ZWICHEL)
Curator Summary
encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational Description
ZWICHEL (ZWI); FUNCTIONS IN: microtubule motor activity, calmodulin binding; INVOLVED IN: trichome branching, pollen germination; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), FERM, N-terminal (InterPro:IPR018979), Band 4.1 domain (InterPro:IPR019749), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.1); Has 92267 Blast hits to 53660 proteins in 2386 species: Archae - 1115; Bacteria - 10663; Metazoa - 44616; Fungi - 7060; Plants - 5081; Viruses - 192; Other Eukaryotes - 23540 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65930.3

Model type
Protein coding
Short Description
kinesin-like calmodulin-binding protein (ZWICHEL)
Curator Summary
encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational Description
ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2).
Link
InterPro Scan - TAIR

AT5G65940.1

Model type
Protein coding
Short Description
beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary
hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description
beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65940.2

Model type
Protein coding
Short Description
beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary
hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description
beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 31717 Blast hits to 31706 proteins in 2246 species: Archae - 411; Bacteria - 21637; Metazoa - 1269; Fungi - 836; Plants - 624; Viruses - 0; Other Eukaryotes - 6940 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65940.3

Model type
Protein coding
Short Description
beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary
hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description
beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 31609 Blast hits to 31599 proteins in 2217 species: Archae - 411; Bacteria - 21537; Metazoa - 1271; Fungi - 809; Plants - 626; Viruses - 0; Other Eukaryotes - 6955 (source: NCBI BLink).
Link
InterPro Scan - TAIR