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54-0904-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4304060 [Map]; Strand: c
      • AT5G13420.1 - [+] show detail - Aldolase-type TIM barrel family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0904-1 - 5-prime edge 
    CCTAGATCCT TCGTCAATTT CCGCGCTTTG AATGCAAAGC TTTCCTCTTC 
    TCAGCTTTCT CTTCGTTATA ACCAACGATC AATACCTTCC CTCTCGTAAG 
    TCTTTATATC CATTTGATGC ATGTCTTTTG TCTCTGTTTC TCGCTCTTGG 
    GGTTCACCAA AAATTGAATC TTTTTAGCTG GAAACGTACC ACGAATCTCA 
    AAGTAACATT TTTTATAAGA TGGATTAGGA AAAGCAACTG TATTTCCCCT 
    TTTTGGTTGG TAAAAGTCTG ATTTTTTTAA TGATTGTGTT TTGCTTCCTT 
    TGTTTAATTT GCAGNGTGAG GNGTTCAGTG NCTGGGGGAA ATGGAACTGC 
    TGGAAAGAGA ACGACTCTTN NTGATCTNTN TNAGAANGAN GGGGAGANNN 
    CNNGGNGTGA NAANNTNTGN G

AT5G13420.1

Model type
Protein coding
Short Description
Aldolase-type TIM barrel family protein
Computational Description
Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR