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54-0913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 746300 [Map]; Strand: c
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0913-1 - 5-prime edge 
    CTTGAAGTNC ATCTAACATG TNNTGNNGAT AGANTGANNC TGGNAAGNAC 
    NAATGTCNTT GGACGGATAN GATGANTACC ATCAAGGATA CTCATACNCG 
    ATNCTTGTGT GGTTCNATNN CTTANANNTA CACACNATTC ATNNATTNTG 
    ACCCGCANAC CNTTCCCGGG GCTGGNNAAC CNCCCNTGGC CCNNTNGGAT 
    CAGCTTCTTT ATTGTTGCAC CAAAACAGAG GTAGTACGGG ATCATGATCA 
    ACTGACGTAT TGTCACCATG GAAAGGGGAT GTCTTGAGAT TGAAAAAGTG 
    TTCTACTGAC TTCCCTTGAT CATCCTGTAA TGTAATATTG TCAATAATCA 
    CTGTTGAGGT GAGTCGTACA ATAGGGCATG CGAAAAGAAG TGGAAGAGGT 
    AGGTTGTCAC CGGAGTCAAT GGTTTCTTCA TCGGAGGAAG TTTCTTCGTT 
    TTGGATTGAT AATGGTTTTT CGATGGTGGT TTCTTCATCG GAGGAGTTTG 
    GGGTGTGTAT TTGTGGTAAT GGTTTCATAA CTTTGTGGTA TACAAGAAAT 
    GGTTTCCCAT CGATTTCCAC CTTACGAAAT TCTCCGAACA AGTCCATGGC 
    TGCTCAACCG GAGATTGTTT ATGAGAGGGT TTTGGGATAT TGGTATCCTT 
    TTGCCTTTAC ATATGTCTAT ATATAAAAAC AAACCACTGA AATGTGCTGT 
    CCCCGTTTTA ATTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 746403 [Map]; Strand: c
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0913-1 - 3-prime edge 
    GGCATCATGT GCAGAAAAAA AGTAAACGGT CTCGTATATT ATTGTGCTCT 
    TTGTGACATG TATATGCATA CGCTTTGTGC CCAGGCGGTA ATACCCTTTT 
    TCATANACCA ACCAAAAAGG CATGCCCATA TCCTCACCCT TTTCCCAAGG 
    CAAGCTTCCT TAACCTGCAN TNTTTGTNGT GTACTTGATG AACTTCATTT 
    CACCTACGTT TGTCCTATAT GCGATTTTGT CACCCATGCT GATTGTATAT 
    ATATCCCACA AACCATAAGA ATATCTCGCC ACCACCACTG TATCTCTTTC 
    ACTTCTTCTC TTCTAAAAGG AAAATGGTCT TGTGGAGTTT GCCNTCNANA 
    AGTTAACAGG AAGTATGGTG CATACACTTG CAATGCGTGT AATGGCTACC 
    TGTTCACCAA AGANGTGCA

AT2G02680.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, RanBP2-type (InterPro:IPR001876), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02690.1); Has 1749 Blast hits to 685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 10; Plants - 1682; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR