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Mutant Lines
54-0986-1

54-0986-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24755953 [Map]; Strand: w
  - AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: exon10 (CDS)
  - AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: exon10 (CDS)
Flanking Genome Sequence: 54-0986-1 - 5-prime edge
```
CNGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGNATTT 
TCCCATCCTA CTTCTCATTC GATAGAGAAA GCGTTGAGAG ATCAAACCGG 
GAAATTTACA GAGATC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 24755893 [Map]; Strand: w
- AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
  Distance: 0; Region: exon10 (CDS)
- AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
  Distance: 0; Region: exon10 (CDS)

GCCAAACCCA TCGCGGATCT AGCTGTGACT AGCTGAAGAA GTATGATTCC 
AAACGCGTAG ATATCAGATT CGGGAGTTAC CACTCCGGTT CTTTGGTATT 
CAGGATCTAT GTAGAAGAAT GTTCCAACTG GACCGGTTTC GTTGAAAACC 
GTTGAGGCAT GAGAAGGATC AAGATTAACC ATTTTGGAAA GGCCTACGTC 
TCCGATTTTG CTCACATTGT TCCGGTCTAG GAGGATATTG GCTGGTTTAA 
GATCGCGGTG AACGATTGGT CTTGGTTCGT TTGTGTGGAG AAAGTAGAGT 
GCTGAAGCGA TCTCCCAAGC GATTCGGAAC CGCTCGAACC ACCGTAATGG 
CGGCGGTTGC GGTGTGTCAA CGTTTGGTCG GCGTTTCATG AGTCTTTCCT 
CAAGGCTTCC GTTGTGCATA TACTCGTAAA CTAAGCTTCC GCGTTCANGA 
CACGCGCCTA GGAGGAGAAG CAAGTGTGGA TGACNAATCT TGCTAANAAT 
CTNANGCTGA ACAANTNTCN NNNANAACGC CNTCNNTTTA NGAGAACANN 
NATTTTGCTN GNNGGNTNNN AANNNANNAN NNNNNNTNNN CCNNTNGNNN 
AAANNG

AT5G61560.1

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 112471 Blast hits to 110615 proteins in 4538 species: Archae - 130; Bacteria - 13122; Metazoa - 41054; Fungi - 8748; Plants - 32669; Viruses - 288; Other Eukaryotes - 16460 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.2

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1).
Link: InterPro Scan - TAIR