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54-1132-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 194420 [Map]; Strand: c
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1132-2 - 5-prime edge 
    ATCATACCAA GACTTAAGGT TTCTCCTGAA CCAGCTTTGA TCGCCGGACA 
    AAACGGTAGA AGAAGAAGAA GAAGAAAATT GAGATTTCTT CAAAGCCAAG 
    GCCGAGAGAG AGAGAATGAA GAAGATTNAG CAAAATGATA GCTTATAAAG 
    TTGATTTCNG AGGAAAAGTT GATGATCCAA TCTCCAAGCC ACATTGTTTC 
    ATCTGACAAC TTTTCCAGGT TCTGTCTGAT AAAAACCCCC CCAAGCTTCC 
    GTAATCATAC ACGATCAAAT CAACAACAAA GGCGGAGAAA AAAGGATCAT 
    AAAAAATGCC TCTTTAAATT TCCAAAGTTG ATGAACAACC CCCCCAATAG 
    AATAGAATAA ACCTTCTTCT T

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR