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54-1146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 141147 [Map]; Strand: w
      • AT4G00320.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-1146-1 - 5-prime edge
    NNACTCCANT AAGGATGGAA ATCATTACCA CATCTACTCA AGAATTGTCC 
    AAATCTACAA ACTCTTGTCT TCGAGGTACT GTATACATCC TTTAAATCAA
    CCGATGACAT GCTTTTGAAA CACATATAAT TAGACTTTGA TATTGATTCA
    TTTTATGTTT CAGGGAATGC ATCATATATA TAGGAAAGGA AGAGCTTGCG
    GGGACGTGGA CGAAGATGGG ACGTGCATGT GCNAAAATCT GGATAATATG
    AGGGTGAAGA AGGATATTGA TGCTTGTCTA TCGTCAAGTC CGGTG

AT4G00320.1

Model type
Protein coding
Short Description
F-box/RNI-like superfamily protein
Computational Description
F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G41830.1); Has 1728 Blast hits to 1676 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR