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54-1173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26454578 [Map]; Strand: c
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1173-1 - 5-prime edge 
    GCCACCGCCT TGCCCAAGGG TCTTGATGAG GATCAGAGCT CTATTCCTCA 
    TCCTACAGGG AAGCAAATGC CCAATCAGAT GCACAATGTG GTCGTCAACA 
    CCATGGCGGT TAGGGCAAAC CCTCCGAGGA AGTCGACTAG CAACGGTGTG 
    AGCCAGAGTA ATGGTGTGAA GCAACCTAGC AGTCTACAGC AGCACCAGAA 
    TTCGACTTCG AGCGCATCCA AGACTCGAGA GCTGGAAGAC TCAGCCACCA 
    AGTGTCAGAT TAAGGCGATG GCCGCGAGAG C

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26454693 [Map]; Strand: c
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1173-1 - 3-prime edge 
    AGCGGTGGCG GAGGTGGAAT TNGGATTTNC CTTGGCGANA GCNAAGGCGT 
    GGTGAATGGA AGTANCNTNG TTGTTGGTGG NAATGGNGTA TTTGCTGTGC 
    TCTTGCNCAG TTTCGAAGGC CANGTGGCCA ACGANTAGCC GAATGGCGTT 
    GTGCTGAGCG AAGACTTCTT GGCNCTTGGG GTGATTGGAC ACAAGCTCCG 
    ACGTAGCCCA CGCAACCACC GCCTGGACTT TCATAGGCCC TTCTTTGAGG 
    ACTTTGCCGA AGACGGAACA AGCGCCGCCG TGAATCATGT GCTCCACGCT 
    CTCAGGATCA CGTCCCAGTA ACCCTAACGC ACGCGCTGCG TTCTCTTGCC 
    CCTCGGGCTT CCCTTCCTTG AGCAGTTTAA GGGAGAAGCA CCAC

AT5G66200.1

Model type
Protein coding
Short Description
armadillo repeat only 2
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR