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54-1182-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26449192 [Map]; Strand: w
      • AT5G66180.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G66180.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G66180.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-1182-1 - 3-prime edge
    TCTGGAGGGA TGGAGTAAAA TCCTGGTAAC CAATTCACCT TCTCCAGTTT 
    ACAGTTAATT TCGGATTCAA TCTCTTCGAA AGCATCCTCG AATCCAGGTT
    TCAACCTTCA AACGGACCTC TCCGGTTTCA ATGCCAAATT CAGAAATTTT
    GAGAAAAGCA AAGGAGGGGT CTCAAGTTAC CTTACATAAC GTGGAATTGA
    ATCTCCGTGA GTATAGATTG AAGGATCAAG GCCATTCGCC TCTAGGAAGC
    TAAGGAAACT CTCCGGTAAC TGTAGCCTTG GACGTTTCTT CCATGAGAAA
    CCCGAGAGAG AGAGAGAAGT GTTCGGTCGG AAAATTAATT AAGTCGGAGA
    ATCGCCGGGC GAGAACAGAG AAGATAAGGG CTTAGGCTGA AGCCCAAAGC
    CTTTTTGTAT GTATACTCAA AAAGCCCAAA CGTTTTGACC GATGAAACAA
    ACAAAGGCTT GTTACTTAGT TTTTACACTT TTACTTGTTC ATCTTTTTTT
    TTTGGGTTTN NACTTANANA AAANCACAGG NTTTTNTNGA TTTTGGTACA
    CAAAAGTTTT NATTACAANA AACNGGATTT TTAANTGGAA AATGATTNCT
    NCNTCNCACN GGCNGTTTTT TTNTTNNATT AAAAAAAAAA AANAATTTTA
    ANATTTTTAN TTANCNNANG GCNCCNCCCC CCCCTTGGGN GGGGAAAGCN
    GGGANCCCCC CANNCCANGN NNCCCC
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26449308 [Map]; Strand: w
      • AT5G66180.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT5G66180.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT5G66180.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-1182-1 - 5-prime edge
    CCTCCAGATG TTCATATAGC CAGAACCAAG GCCTATCAGC AAGGCATGGT 
    GAGAGAGAGC AATCAAATAC CAACTCTCCT CTCGCTCATT CGGTTTTTCT
    TAACCTTACT TGTTCTTTCT TCGGGTTTCA GATGTACNGG AATCGATGCA
    GCTTCCGGTG CCGCTGTCTC AGCTCTTGGT ATCTCCCCAG GAGACCATGT
    CTTGGATCTT TGTGCTGCTC CTGGTATTTT TTTACATTGA TCAGCTGATT
    TGGTTTCCTT AGTGTGTCAA TTCGTCCTTG TAACTGCTTT AGAGGGAATA
    ATAATACTCT CAGGTGCTAA ACTATGTATG ATGCTTGACC TACTGGGTCA
    GAAGGGTACT GCCACCGGTG TCGATGTTGC AAGGCATCGT CTTGCTGCCT
    GCAGAACTAT GCTTCTAAAG TATGGGCTTG CTGAAAGGAG CCGGCTTTTT
    CTTGCTGATG GAACCACTTT CTCAGTCCCA CCAACCAGAA ACCTACCATG
    TAGAGCAGCA ACACTTCAAC ATCGTCAAAA CAATATGTTC CTTTAAGCT

AT5G66180.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8827 Blast hits to 7075 proteins in 2181 species: Archae - 455; Bacteria - 6424; Metazoa - 542; Fungi - 251; Plants - 202; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 2637 Blast hits to 2540 proteins in 1031 species: Archae - 209; Bacteria - 1812; Metazoa - 180; Fungi - 59; Plants - 92; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.3

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8458 Blast hits to 6982 proteins in 2152 species: Archae - 444; Bacteria - 6084; Metazoa - 538; Fungi - 249; Plants - 190; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR