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Mutant Lines
54-1196-2

54-1196-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26443840 [Map]; Strand: c
- AT5G66150.1 - [+] show detail - Glycosyl hydrolase family 38 protein
  Distance: 0; Region: intron3 (CDS)

NCTCNANNAN AGACAAGAGC AAGTGAGGAG ACTAGTGAAA TCCGGGCAAC 
TAGAGTTTGT GTAAGTAGGT CACGACCTTA ATTTGATCAT TTTGGCTACG 
TAGTGATGAT ACAATTCACA CAATCAATGT GCANAAATGG AGGATGGGCT 
ATGAATGATN AAGCAACGTG CCATTACATA GATATGATAG ACCAAACCAC 
AAAGGGGCAT CGGTTTATAA AGCAACAATT CAACACAACT CCACGTGCTG 
CTTGGCAAAT CGATCCCTTT GGTCATTCCT CTGTTCAAGC TTACCTCCTT 
GGAGCAGANG TCCCTTCTAA TCTATCTATT TCTTTATTTA TTTGTCCTTA 
GANCAAATTT TGCCTTTCTT GAATGTGAGT GTGTTTTAAT TTGGTGTGGT 
GCA

AT5G66150.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family 38 protein
Computational Description: Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR