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54-1328-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25712953 [Map]; Strand: c
      • AT5G64280.1 - [+] show detail - dicarboxylate transporter 2.2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1328-1 - 5-prime edge 
    GAAGGCGCTT GGGCTTTCAT TGGCTTAACC GCTTCAATCG TCACCAAAAC 
    GCTTCCTTTC TCAACCGCTT TCGCCGCTTT TACCAATGAG CTCATTTGGT 
    TAATCGCTAN TTCTTTCTTC TTCGCTCGTG GATTCATCAA AACTGGTCTC 
    GGCGATTTNT TTTNTACTTA TTTCGTCAAG TGGCTGGGGA AAAGCACTCT 
    TGGTCTCTCT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25713072 [Map]; Strand: c
      • AT5G64280.1 - [+] show detail - dicarboxylate transporter 2.2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1328-1 - 3-prime edge 
    CCTACAGGGA GAGGACCAAG GACGAGACCT GAGATGGTGA AGAGGAAGAT 
    TGAGAGTAAT TGCCATCCTT GTGAGGTTAC TTGTTCTGGT CTTGGGATTA 
    AGAATCTGAC TATGAGGCCG ATTGAGACAG AGATCGCGAG AGGAATTAGC 
    NTTCGCTCCT TGCGGCTGCG GCGGAGAAGG AGGGGGAGGT TGAGGTTTGT 
    TTTGTTCCTC CGGCGAGGAA GAGGCGGTGG CGCGTAGAGT GAATCGAGGG 
    GAAGAGATGG AGAGTGATCG GAGTGTTGGG GATGTGTGTA CGGAAATCGA 
    CGGTGGAAGT AACGCAAATG ATTTGGAGGA AGATCGATGG AGAGATAGAT 
    AGGAGGCTGA GAGTGAGATT GAACGGAGAG CCAAACTCTC CATCCCGGGA 
    GAGAGAGTGT GTGTTCTCCG ATATCAAAGT GTTACTTTCT CACCGGAGGA 
    GCGAAACTCT CTGTTTGTTG TCTTTATTAA AAAAAGTTAA ATAAAAACGT 
    TATTCTTATT TTCCCCATTA TTTCATATTT TACTAATTAA AAGATAATTT 
    ANCTAAAACT TTAAAATTAA NAAGTATTCA AAATTTTCAC ATTTTGGATT 
    AACTTGNTTG TNTTTTTGTN TGACCATAAA ACCNAAATTA CCNAATTACC 
    ANTATTGTGT TNTCTTTTCG AAATTTCANA ATTATTTACT GAATTCAAGT 
    AAAAACTCNT NNATCGTTNG TTTACCTTTA ANNNCT

AT5G64280.1

Model type
Protein coding
Short Description
dicarboxylate transporter 2.2
Computational Description
dicarboxylate transporter 2.2 (DiT2.2); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, sodium ion transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transport 2.1 (TAIR:AT5G64290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR