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54-1334-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26660566 [Map]; Strand: c
      • AT5G66770.1 - [+] show detail - GRAS family transcription factor
        Distance: -34; Region: promoter
    Flanking Genome Sequence: 54-1334-1 - 5-prime edge 
    ATGACCAGAG AGAAACGGCG GGATCTCAAG CTTTGGATTT TAGAAGAGAG 
    AGAGAGGTAA AGAGAGGAGA AGAAAGAAAG GTCAGCCCTA GAAAGTGGAT 
    CAACAGTTTG ATTAAAATCT GACCGTCTGA TTTCATTGTG GGCCCACACA 
    TTTTTCTTTG TTATTTTTAA GACAATGATA TTNGTAACGG TAATAATACC 
    GATATAAACA CACCACAACT CTTAACCAAT AACATATTTA TGCATACATT 
    ATAGAAATCA TTGGATCTAA TTCCAAATTG TTAGTCTCCT AAGAAAGAAA 
    TAGAGAGATA TGTACAAGTT ACTCCCACAT TAGTTTTTGT GTGTAAGAGA 
    ATGTTATCAT AGTTTTACAT TGTGAACTCG TCATTATCGA TTCATCCGCT 
    AACAAGTTTC TGAATTTGAG TTCACAATGT TGTGTAACAT TTTTTAAAGA 
    CGATATGACA TATAATGGCC GANGTTGNTC ATATTAATGT CTCCGGTTGG 
    GATATAACAA TGTAAATTTG TTCACGTGAC GCACACTCTC GCGCCAAACA 
    AAAATTTAAC NGATTTTATA ATCAAATACT AAAAAATGNT GCTTANTNAG 
    GGATAGAGAT NAATTATTTA AGGGGGCTTT TTNGGGGAGG AACNCTCGNG 
    GGNGGAANNG ANTTGAAAAA ACTTGGGGNC TTTTTATAAT AAAAAAAAAC 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26660682 [Map]; Strand: c
      • AT5G66770.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1334-1 - 3-prime edge 
    CTGGGCAGCA TCCTCTTCTT CAGTGACCGC ANNTCTGCAN GTTNGGNAGN 
    GGTNTTTATA GGACCGCCGG GAGGGTTAAA TCTAGGCGTT AAGAATGGCT 
    TACATGTGCA CTGATAGTGG CAATCTAATG GCTATTGCTC AACAAGTCAT 
    CAAACAGAAG CAGCAACAAG AANNNNNACA GCAGCAACAT CATCAAGACC 
    ATCAGATTTT TGGTATTAAT CCTTTGTCTC TTAACCCATG GCCCAATACT 
    TCCCTCGGGT TTGGGCTTTC AGGTTCGGCT TTTCCCGACC CGTTTCAAGT 
    TACCGGCGGC GGAGATTCCA ACGATCCTGG CTTTCCTTTT CCTAACTTAG 
    ACCACCACCA CGCCACAACC ACCGGCGGTG GGTTCAGGTT ATCTG

AT5G66770.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G50650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR