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54-1345-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6913288 [Map]; Strand: c
      • AT3G19880.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -684; Region: promoter
    Flanking Genome Sequence: 54-1345-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC GACATGGTCC TCATTTTTTT TTCTTAATTT 
    NAAGTCTTCT AGTNGGCANA TTTTTTTTNG TTAAGGGAAA AACTCCNNNG 
    AANGCNGNNG NNAAACTAAA ANANAANANG TCCCCAAATA AAAGGGCNGT 
    AAGCCCANGT NAAANAAAAN GATNCNCGTT TNGAANAAAG GNGCATTTTG 
    GTTAAAAATA AGGGNCCTTT TAAGNTNTAG AACAGGGCCC ANNTAAANAT 
    TGGGACNNGC CCCTTTTTTA GCCGGGGNNG TTGAACCAAA ANCCNCCCCG 
    GGAAAAANTT NTNTNCCTCG CCGNGGNGAA NNANATTTNT AGAACAAAAC 
    TTGGGGGGGA AAGGCNGGNC CNTTTTANGG GGGNNGTTTT TGCCCCCNTT 
    TTTTNAAANG ATTNGGGGAN AAAAAAANGG CCGGGANNAA AAAAATTTGG 
    GGGGGGGNAA AAANTTTTTT TGGANGGNGG GGCNCNNCTT NNNTTNTTTT 
    TTTTNAAAAG GGGGGGGGAA ANAAAAAAAN NNNNNNNGGC CCCNNGGGGA 
    AAGGGAAAAN NTTTTNCNCG GCCCNGGGGG GNGGNGGGNN NTTCCANCGN 
    GGGNNAANGG GCTCCNTTTT TTTTNGGNTG GGGGGGGGTT TTANAAAAAA 
    AAAAAAAANT ANGNGTTTTG GGANAAAANG ANAAGCCCCC CCNAAAATTT 
    TNGGGGGGGG GGGGGGGNAA NAAAAAAAAA CCCTTTTTTT TTTTNTGGGG 
    AAAAAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6913296 [Map]; Strand: c
      • AT3G19880.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -692; Region: promoter
    Flanking Genome Sequence: 54-1345-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    AGCACCTCTG GCACTCCCCT AGAGCCGGGT ATGATGTTGA TGTTTCTGCC 
    GCCAAAATGT CATCTGCTGT TTGAAATGGA AGATGTTGAA GTATCGACAT 
    TGGTGCAGCA TATATAAGTA ACAGATCATG GCCTTGCTTA GCTTATGTTA 
    TGTTGATGTC TTGATGATTA CTTAGAAGCT

AT3G19880.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G05080.1); Has 1001 Blast hits to 942 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1001; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR