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54-1390-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19609952 [Map]; Strand: c
      • AT2G47895.1 - [+] show detail - other RNA
        Distance: -521; Region: promoter
    Flanking Genome Sequence: 54-1390-1 - 5-prime edge 
    CANGCGGAGC CCATGCCTTA GGATGTTTGT CTTCAGGGGG CNATCCAATT 
    TCATCTGAAG GGAAAAAACA AGAGTGAAAG CTGCNACNGC ATCGGAANNT 
    CTGTTTNGNC GGCCATCGGG AAAAGACNCT TTTATATTTG GGCTTTANAA 
    GAAANTGGNC CAAACATGCC AACCTATATT GGGTTTACTA TGTTACAACT 
    TGAGCCCATA ATATCAATTA CATCAAGCCC TTCTTGCTCC ATGGATCTTT 
    AATGGGTCCA ATCTCACTTT CTAACATTAC AACAANTTCT TTTGCTGCTT 
    GCTTGTCTTG AGATTGTATA TAACTGTGAA CCATGTTTTG T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19610066 [Map]; Strand: c
      • AT2G47895.1 - [+] show detail - other RNA
        Distance: -407; Region: promoter
    Flanking Genome Sequence: 54-1390-1 - 3-prime edge 
    GCTCGCGGCA ACAAATATTT GCAATCTACC AATATATAAT AATCTGAGGC 
    AGTATAAAAA TACAAAAAAA AATGACAACA CTTTTTGGCA GATCATTCCT 
    GCTACGATGA ATCTGTCCCA ATGATAATCT GAGAAGTAAA GTAAGTTTTG 
    GTTGAACAAG GAATCTGGAG TGGGTTTTAC TTGTTGAGCA ATCAGTAAGC 
    ACTAAATCAT GTATCANAGT TGNGGTTATA TTCTCTATGT TCTTCTTANA 
    ATT

AT2G47895.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT2G47900
Link
InterPro Scan - TAIR