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54-1436-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19438245 [Map]; Strand: c
      • AT2G47360.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1436-1 - 5-prime edge 
    ATCCNTCGAT ACCACAGAAG CATCACCTCA TGAAGACCAA AGAAAAACAC 
    AAGCCTGCTC AAGAAATTGC GTTCGCTTCC GATGATTAAA CCGTTGGAGA 
    TCGTTGTTTC GAGGCCTATA CCGACGGAGA TTTGAACAAG GAAGAGTGTT 
    TCCNCGCGAT GCTGACATGT GGATAAAAGG CAATCGAATG CTTTGGATCT 
    GTAGCTGTGA TCTTTGTGGT TAAGCCAAGA ACTAGAGTGT AAACGCTTAT 
    TGACGAAACG ACAGCGTNTA CGATCGCCGG ATTCGCGCGA AGAAACAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19438361 [Map]; Strand: c
      • AT2G47360.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1436-1 - 3-prime edge 
    ACAGTGATCG TGAGACCGGG TGGTGGATAA CACGTTGTTA GGAGGAGAAN 
    ACGGTCGGCG AACANAANAN ACGGTGGTGG AGAGGGTGGC TTTGGCCGTT 
    ANCTGTGGGA CCTTGTGGTG GTGGAAGCTT CNAGATGAAG TACANGCTTT 
    GGTTGGTGTG GCANANGCTA AAAGAGCATT GTTGTTGTTA TTACCAATTG 
    ATGGTAATGT CAACGTTAGT TTTGATGTGG GAACAGTTGA TTTTGTGAAT 
    TGGTGGCTAT ATTATATGGT TGTGACNATT GGTATGGTTA GGATCATTAA 
    AGGGTCTCTG TGCTTCTCCT

AT2G47360.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR