Home
Mutant Lines
54-1511-1

54-1511-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18171677 [Map]; Strand: c
- AT4G38990.1 - [+] show detail - glycosyl hydrolase 9B16
  Distance: -728; Region: promoter

TTCAAAAGCA ACCCCAACTT CTCTTGATTT CAATTTCTTT CCCAGATTTG 
TAAAAATAAA TAAATGAAAA TGTAAATACA ATATTGATTG AGGTAAAAGT 
ACGCATCAAG AGATATATAT TTATGTATGG GAAATTCTTC AAGTAAAGGA 
AAACACATCT TTAAACCTTT TAGTAATATT TTTAATGGTA CTTACTTATT 
TTTTTTAGGT ATAATTTATA CCGTATAAAC AATGGCAAGG TACATAAAAG 
AATTTTATAA TGATTTATTC TTATGCAATT TACGTTTTCA TGATACAAAT 
TTCTTTTGTT TTACCGTTGT TTATCTTTAT GTCTTAAAGT ATTTATATAA 
TTAATAAAAA TTAAAAGAAT ACACATTATG ATTATAATAT GTATTTTTAA 
AAAATAAAAT AATATGTATT TATATTCAAA CAGAAAATTA TTTATTGCAG 
ATATGGTTTT ATTTGTGGTA ATTTAGATGA TGTTTTATAA GACTCGATAA 
TATTTTTATC GCTTTCATTC GTTTTTTTTT TTTNCCAANT TAANANNTCC 
TNTTNTTTTN TNAACNAANT TNGAAAAAAA AAAACNCCCC AATTTNNCCT 
TTTAACCTGG GNCAAAAAAN ACNNTTTACC AGANAANAAA AAGNNCTGGN 
TNGGANNAAA NCNNGGGGGG GAAAGNTTTA ANNTTAAAAA ATTTC

3 prime edge [+] show sequence

Chromosome: 4; Position: 18171793 [Map]; Strand: c
- AT4G38990.1 - [+] show detail - glycosyl hydrolase 9B16
  Distance: -844; Region: promoter
- AT4G39000.1 - [+] show detail - glycosyl hydrolase 9B17
  Distance: 0; Region: exon5 (CDS)

CTTTTGAAGT ACGCAAAGAC ACCAACAAAA GGTGCATTGA TGTAGGTTGT 
GGGCTCAGTC TCACTAGCAT TTGTCCGACC TCCAATAAAT CTATCATCTA 
CGTCAGGCCC GCCAATCACC GCACCTATAA GAATGTTGGG GTTTGGATTG 
GGTGATGAGA AAATATTCCA TCCTGCTATG CACCCAAAGG CAGCCGGATG 
AACGGTAACA GACGGTATAG ACGAGCCACG GTGATGGATC AGTCCCGGGT 
ACCGCTCGCC GTACCCAATC ATGTATGACA ACTTCATTGG ATTATCTCCC 
AAAACGTAGT CTACCTACAA AAAATAAAAC ACAAATATTT TAACAAACAC 
AAGAAATATG GAAGAAAAAA ATGATCTTAT GATTCTAATA TACCTGTCGT 
TTGACTATGC GGCGAAGAGA ATCCGGTTGA AACTTGAGGT TACCGCAATT 
GAGCTGTTGA GAAGATGTAG AGAGGTAATC TGCGTAGGTA AGGAGAAGGA 
AAGATAGTGC GGCCGTGTTC TGGAGCTGAG TGCTTCCAGG TTTGTAAATG 
AGACCGCCGG GAGTGTAAGA CATATGTGGA CCATTGGTTT CCGGCAAAAA 
TGAACACATC ATTTTCTCCG CGGTATCTTT ATATGCGGCT ATCGCGGTCA 
CATTATTCTG AAGTACTTTC CTGTTCAACC AAATTGGNTT NACCGGTCAC 
ACTTATCATT

AT4G38990.1

Model type: Protein coding
Short Description: glycosyl hydrolase 9B16
Computational Description: glycosyl hydrolase 9B16 (GH9B16); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B17 (TAIR:AT4G39000.1); Has 1522 Blast hits to 1511 proteins in 198 species: Archae - 2; Bacteria - 400; Metazoa - 176; Fungi - 17; Plants - 897; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39000.1

Model type: Protein coding
Short Description: glycosyl hydrolase 9B17
Computational Description: glycosyl hydrolase 9B17 (GH9B17); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B18 (TAIR:AT4G39010.1); Has 1741 Blast hits to 1731 proteins in 246 species: Archae - 2; Bacteria - 582; Metazoa - 188; Fungi - 17; Plants - 915; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR