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54-1542-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 417022 [Map]; Strand: w
      • AT5G02110.1 - [+] show detail - CYCLIN D7;1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1542-1 - 5-prime edge 
    CNGGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCA CACTGTTCCG AGAGTGAGGA GTAGAATACC 
    TTATTACCGG TTTAATCAAA CCGGTTCAGT TTCCAAATGG ATAATCTACT 
    CTGCGAAGAA TCTTGGCCCG CGAGTCCTTT AACCCCGGAG CCTTTACCAA 
    ACTTCCGTCA CCGTTCTCAC GACAATGACG TCGTGAAGAT GGATCCAGAG 
    ATAGACGCAG CGACGATGGA GGAAGCCATT GCTATGGACT TAGAGAAAGA 
    ATTATGTTTT AACAATCACG GAGACAAGTT TGTTGAGTTT TTCGTNTCAA 
    AGAAGTTAAC CGATTATAGG TTCCATGCGT TTCAATGGCT AATCCANGTN 
    CCTTAATNAT TATTATCTGT TTGTTTGTCC ACNGTGTGAT ATTTNNTNNC 
    AAANNNGGGG GATGTGAANA TANTTATNNC NCCTNTNNNN TCCNTCNCGA 
    AGGCNNNAAA ANNTGGGTTT ACNNCCCCNC CCNNNGGGGG GGGGAAAAAA 
    AAAANTTTAN NCCACCNNTT NNNTNTTNNT NAAAANANNG GGGGGGGNNT 
    TTTNTTTTTT TTTTNCCAAC ATNNGNNNGN TAAANAAACC AAAAGTNAAT 
    GGGNGGGTTT TCCTTNCTCA GACTNGGAGG NNGGNTANAT NTTNTAAAAA 
    AAAACGGTTT TTNCCCCNCC NTTANTTGNT TTGGANNGGG NCCNCCTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 416969 [Map]; Strand: w
      • AT5G02110.1 - [+] show detail - CYCLIN D7;1
        Distance: -53; Region: promoter
    Flanking Genome Sequence: 54-1542-1 - 3-prime edge 
    GTTATGAGAT CGGAGAAAAA GTGACGTCTA TATAAGCGAG AGAGAGAGAG 
    AGAGAGAGTC GTGGAGAAGA ANNTGGGAAG TTATGGAANA CAGTTAAAAG 
    TTAAAAANAT AAGTCGGNTC ANTCANAANA ANATGCGGTC GGTTTANTAT 
    ATNCCGGTTN NTTTAGACNC TCCNCCTTTT ATAAACNGNA GTTTACACAT 
    ATTTNACANA CTANTTCGAA AGACTCTCTC ACATAATTAG ATATTNTCTT 
    CATTTCTTTA GTTNTCTTTA CGATATATTT GTGNTCNCTT AGTGACTTTT 
    NATNGTNCGN TGAGAAAANT CATACTTNTG AGTGTGTGTG TGTNTTCNAT 
    ATTCCNGATA AAAGTGNTGN GANATTTTTT NNNCNCCNGG GTGNGNGGNG 
    NGCNNNGGCC NCNCCGNGGG GGCCCCCCCC CCCCNGGGNG NGCNNNAAAA 
    ANCCCCCCCC CCCCCCTTTT TTNNANAANN NTTTTTNNNN NGNNNNNNNT 
    NTTNNNNNAN NNNGGGGGGG NTNNNNNNNN CCCNNNNNNG GGGGGGNCNC 
    CNCTTTTTTT TTTTTTTTNC CNC

AT5G02110.1

Model type
Protein coding
Short Description
CYCLIN D7;1
Computational Description
CYCLIN D7;1 (CYCD7;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 2441 Blast hits to 2441 proteins in 290 species: Archae - 0; Bacteria - 0; Metazoa - 935; Fungi - 354; Plants - 916; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink).
Link
InterPro Scan - TAIR