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Mutant Lines
54-1555-1

54-1555-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 409381 [Map]; Strand: c
- AT4G00950.1 - [+] show detail - Protein of unknown function (DUF688)
  Distance: -2239; Region: intergenic
- AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -2737; Region: intergenic

GTTCAACAGA GATATTAGGA ACAATCATTC ACAAAATGAG AAGGTAATTT 
CCGTATCAAC AGTTACTGGA TGAATCTTTA TCTTTTCTAC TTCCACTGAA 
TAGCTTTTTC TCCCAATTCA GTGTACTCTC TGATTAAAAT CGTGAGTCAT 
TTTGAACTAT ATCATTCTCC TTTCCAGATT TTAATTTATT CTAAAAACGG 
TAGAAACTCA GAATATGTAG ATCTTCTTTT TTTTGTACAC CAAATAGATA 
CCTTAAAGTC AGAGTATGTT TTGCGCATAT ACATAGATTG TGAGTGCTTC 
GCTAAAGAAT CAGCCGAGAC ATTTGCTGAT CTGGGAATAA AACTACAAGA 
GAAGCTAGAA AGCCTATTAA TGCAGATAAA TATGTCACTC

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 409504 [Map]; Strand: c
  - AT4G00950.1 - [+] show detail - Protein of unknown function (DUF688)
    Distance: -2362; Region: intergenic
  - AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: -2614; Region: intergenic
Flanking Genome Sequence: 54-1555-1 - 3-prime edge
```
AAATGTTTCT GTTGAATACC AAAAACATGG GAATTAATTA GCAACTCTTC 
CTAGATATTC TGCAAATTAA GAATAGACTA AAGGAACTAG AACTCCATAG 
CCGAGAAAAA AAAATCATAT GGNGGACTCA TGTAGTACNG GTTCAAGGAC 
AAGACTACTG CAAAATGAAC ACTACGCTAT GATCTAATAG CTTATGCATA 
CT
```

AT4G00950.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF688)
Computational Description: maternal effect embryo arrest 47 (MEE47); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00955.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR