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54-1611-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29512873 [Map]; Strand: c
      • AT1G78440.1 - [+] show detail - Arabidopsis thaliana gibberellin 2-oxidase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1611-1 - 5-prime edge 
    CTCGTGAAAG CATGCGAAGA CTTCGGCTTC TTCAAGGTGA TCAACCATGG 
    CGTTTCCGCA GAGCTAGTCT CTGTTTTAGA ACACGAGACC GTCGATTTCT 
    TCTCGTTGCC CAAGTCAGAG AAAACCCAAG TCGCAGGTTA TCCCTTAGGA 
    TACGGGAACA GTAAGATTGG TCGGAATGGT GACGTGGGTT GGGTTGAGTA 
    CTTGTTGATG AACGCTAATC TTGATTCCGG TTCGGGTCCA CTATTTCCAA 
    GTCTTCTCAA AAGCCCGGGA ACTTTCAGGT TTTTAAATGT CCCTTGCTTT 
    GATAACACAC CTTTCATTCT CGTACTCTGT TTCGTGCTCT GTTTTCGAGT 
    TAGTGCTCTG TTTTTTGCTC TGTGTTTGTT TTTATAGTTC ATGTTCTATA 
    GCTTTTTATG CTTTATTCTG GATTTTTTTT GGGTTACGTC TCAAGTTTTG 
    TTCTTTAATC TTCAGAAACG CATTGGAAGA GTACACAACA TCAGTGAGAA 
    AAATGACATG CGATGTTTTG GAGAAGATCA CAGATGGGCT AGGGATCAAA 
    CCGAGGAACA CACTTAGCAA GCTTGTGTCT GACCAAAACA CGGACTCGAT 
    NTTGAGACTT AATCACTATN CACCATGTCC TTTTAGCANT AAGAAAACCA 
    ATGGGNGGGA AAAATGTGAT TGGGTTTTGG NGAACACACA AN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29512942 [Map]; Strand: c
      • AT1G78440.1 - [+] show detail - Arabidopsis thaliana gibberellin 2-oxidase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1611-1 - 3-prime edge 
    TTCACGAGGG CATGTTTGGA TTCTGGGTCA GACATATCTA TAACCGGGAT 
    TAGAGAGAAC CCGGATTTTG GTACTGCTAC CGGTTTAGAC AATACCGCCA 
    TTGATATATT TCCTTGTTTG ATAGAATTTT TTTGATTTTG ATAGCCTTTG 
    AAGGCTGAGA CATTGGGTTA TGTACTCGGA GGAGTGTATA TATAGCAGAT 
    GAGATGATAA AGATC

AT1G78440.1

Model type
Protein coding
Short Description
Arabidopsis thaliana gibberellin 2-oxidase 1
Curator Summary
Encodes a gibberellin 2-oxidase that acts on C19 gibberellins.
Computational Description
Arabidopsis thaliana gibberellin 2-oxidase 1 (ATGA2OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase (TAIR:AT1G30040.1); Has 8410 Blast hits to 8364 proteins in 975 species: Archae - 0; Bacteria - 1063; Metazoa - 88; Fungi - 964; Plants - 4898; Viruses - 0; Other Eukaryotes - 1397 (source: NCBI BLink).
Link
InterPro Scan - TAIR