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Mutant Lines
54-1682-1

54-1682-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 30275496 [Map]; Strand: c
  - AT1G80520.1 - [+] show detail - Sterile alpha motif (SAM) domain-containing protein
    Distance: -985; Region: promoter
Flanking Genome Sequence: 54-1682-1 - 5-prime edge
```
NNTGACNAAC NNACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCA TCAGGACTAT ACGAGCCATT ATTATCGAGT 
GCTGTGATAA CAAAGACATC AACACGAGTA GTAGTGGATG CAATCATACA 
AATTTTCATC TATCACAATC AGAATATTCG ATAAATTAAT ATTTATACAC 
TTAGAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 30275495 [Map]; Strand: c
- AT1G80520.1 - [+] show detail - Sterile alpha motif (SAM) domain-containing protein
  Distance: -986; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
CCTCCTCTTA AGACCTCAAT AATAATTTAT CTTCCTGCTT AATTTTAAAA 
AAGCCAAACT GAGGATAATC ATTAAAAAAA ATTGAATTTG TGTTCATTGA 
CTTAAATAAT AAAATAACAA TGAAAGTAAT GTATTTATAT ACACNGAATT 
AATACACCAA ATATATTAGT TGACTACAGA AGGAGCTGGA TTTTAAGTTT 
CAGAGTAGTT TTTTTTTGTT ATCATTAGTT GACCTAACTA CAAAGATAAT 
ACTAACTATT TAGTTAATTA ATCTGGTAAC GAANAGAAGG CATTGATTTA 
ACTTAATATA AAGAAGTAAC ATTGTTTAAT TAATTTGATC ACGTANACAG 
CGGAAGATGC GTATAATACT ATAATATATC TATATGGCCA TCANAATTAT 
ATTTATTTTC TTCTAAATAT TTTGATGTCA CGGTAATCTT CATTGCATGT 
GCAATGNGTT CTAAGGTCGA GTATTAGCCG CTCTCATTAT CTTCTTTTTT 
TTTCCAATTA AAACNANAAT ATNTTTCAAT CCAAAGCAAA ATTTGTGTTG 
GGTTTTNTGT TAAAAAGCAA GTTTATTACT GTAATATATT CGGTTTTACC 
CATATATNTT TGAATAGTAA ATGGAACAAA AGATGATNGA GATNGTGATC 
CCAAAAAAAA ANCNTAANGG GCCCCNTTTC CTACNGNGGN GATTAAGGGA 
CAAACCCTC

AT1G80520.1

Model type: Protein coding
Short Description: Sterile alpha motif (SAM) domain-containing protein
Computational Description: Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR