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54-1724-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 102681 [Map]; Strand: c
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-1724-1 - 5-prime edge 
    GTCTCTTCTT GTACTGCAAG AACAAAGCTA TTGCTACTAC AAGACCAAGC 
    ACTCCCGTGA CAGATGCTGC TAATAGAATG ATGTACACAC TCTTTTTTGT 
    CTTCTCATCC GGAATTTGAC ATGAAGCAGA CACGCAGACA TAGCACCCGA 
    TAACTTGTTT CCTTCCAAGT TTCTGCAGAC ATATATGTGA TATGAATATA 
    AATTCCTCAA GTTATAGTGA AGTCAGTGTC TATGTAATCT ACATTTCCTG 
    TTGAAATGTT GTTTGATAAG CCCCTGTAAT GAAATTTTGG TTGCATCAGT 
    TTCACAAATC TGTATACAAA AGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 102797 [Map]; Strand: c
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-1724-1 - 3-prime edge 
    GAAGAGACAT CGAAATGGTA AAAACATCAA GAAACGATCC TACATTGCTT 
    CTTCTTTGAT TTCTAAGTTT ACTTGGAAGA AATATTCTTA TGAGATCTTT 
    ACAGGTGGTT CTGGTGATGG CGTCAGGACT GGGCCAATGG ACACAACTAA 
    GAGATACTAC AAATACTCAG AAGTTGTGAA AGTTACAAAC AACTTTGAGA 
    GAGTTCTTGG ACAAGGAGGT TTTGGAAAAG TATATCATGG TGTCTTAAAT 
    GATGACCAAG TAGCTGTCAA GATTCTTTCT GAATCATCGG CTCAAGGGTA 
    CCGAAGAGTT CAGAGCAGAG GTAACTCTCT TATACACTAA GAGGTTTAGT 
    CTCTATTAAG TGAGTTCTGT AGTAATCGGG ATATCCACCA ACTTTTGATA 
    ATCAGGTCGA ACTTCTCCTG AGAGTTCATC ACAAGAACCT AACCGCTCTT 
    ATCGGATACT GCCACGAAGG CAAGAAGATG GCGCTTATCT ATGAGTTTAT 
    GGCTAATGGA ACCTTAGGAG ATTACTTGTC AGGTCAGTCT ATTTGCTACT 
    TTGTTTTGGT CACTGGTCTT TTGCTGCTGT AGACATTGTT TTACAAAATG 
    AAGGTACCAT TTGACCGCAA GAATTAAGCG AGAAAAGTGA TGTTTAGAGC 
    TTCNGGGGTT GTTCTTTTAA AAGGTTGTCA CAGGCCAACC GGTGATTGCA 
    CGTTCAAGA

AT4G00236.1

Model type
Pseudogene
Computational Description
pseudogene, similar to leaf senescence-associated receptor-like protein kinase, blastp match of 56% identity and 4.7e-52 P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated receptor-like protein kinase {Phaseolus vulgaris}
Link
InterPro Scan - TAIR