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Mutant Lines
54-1769-1

54-1769-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26419411 [Map]; Strand: c
- AT5G66055.1 - [+] show detail - ankyrin repeat protein
  Distance: -147; Region: promoter
- AT5G66055.2 - [+] show detail - ankyrin repeat protein
  Distance: -147; Region: promoter
- AT5G66060.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: -70; Region: promoter
- AT5G66060.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: -70; Region: promoter

ATTTTAGCAA CAAGGATGAG ATCCGGCCGA GCGAGATTCG AAAGAAGCAG 
GGCAGCAGCA ACAATGGAGT TTATTTTATT TTCTTTCTCG TGGTGGCTGG 
TAGATTGACT ACTAATCAAA GGACGAACGG GAAGTCAGGC CCATATGTTT 
AAGTAAGGCC CATTAGAAAG TGAGGCCCAT TGAAATTGTC GGATACTACA 
TCAGAGGCCG GCGAGGAGGA GAGGAGAAAG CTCCGTTATT CAAGATTATT 
CCGATAATGC AGTCACTCTC CACCCCACAC ACCATCTCTC TTCTTCTCCC 
CAGAACCTCT CCGTCTCGTC TTTCTCCCTC TCTTCACTCC CTTGCTTTCC 
CCACTCGATT ACGGTCTCTT TCCTATTCTT CTCAAACGTC GATCCTCCCC 
GATGCCGGCG ATGATTTCAT TGTCGGTGAC TGTCTCGTCT ACGAGGACGG 
CGTCTTCGAA GATCCTTACC TGGAGAAGGA GGTCACTTCA GGTTGCGAAG 
CAGGAGCGCA AGAAGAATCG GCGTGGCGGG GCTAAGAGAT TAGATGAATC 
CGAGATTGAG CCCGAGAACC TCGTGCCGGA GGAATGGAGG GATATTCAGG 
CNGGAGGTGA ATCTGACGAA NAAGGACAAG CGCAAAATAG CGCANGNAAT 
NGAGTTCCGG GGTTCNGGTG GGANAAAAAA AGGCAAGGGC TT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26419527 [Map]; Strand: c
  - AT5G66055.1 - [+] show detail - ankyrin repeat protein
    Distance: -263; Region: promoter
  - AT5G66055.2 - [+] show detail - ankyrin repeat protein
    Distance: -263; Region: promoter
  - AT5G66060.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 0; Region: exon1 (CDS)
  - AT5G66060.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-1769-1 - 3-prime edge
```
GCTAAAATGA TGGCGAGACA GAGGAATCAT CGTCCTTCAG CTCGTAAATC 
CTCGCATTCA ACGCTTGTAT TCGGCGTATT GATCATGTCT ACTTTCGTGA 
TTTTGATTCT TCTCGCCTTT GGAATT
```

AT5G66055.1

Model type: Protein coding
Short Description: ankyrin repeat protein
Curator Summary: A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description: ankyrin repeat protein (AKRP); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 83523 Blast hits to 28077 proteins in 1268 species: Archae - 145; Bacteria - 7202; Metazoa - 43238; Fungi - 6726; Plants - 3393; Viruses - 1185; Other Eukaryotes - 21634 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66055.2

Model type: Protein coding
Short Description: ankyrin repeat protein
Curator Summary: A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description: ankyrin repeat protein (AKRP); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66060.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2544 Blast hits to 2536 proteins in 339 species: Archae - 0; Bacteria - 388; Metazoa - 1050; Fungi - 75; Plants - 443; Viruses - 21; Other Eukaryotes - 567 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66060.2

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1).
Link: InterPro Scan - TAIR