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54-1789-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1846531 [Map]; Strand: c
      • AT3G06120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1789-1 - 5-prime edge 
    CAAAGAACGA AGGGATTTAA GATGCTCGTT CATTTGCCTT CTTCGATTCC 
    TTTCAACAGC GATGTGAGAC ATGATACTTA ATTGATCAAG ATTCTCTTCT 
    GGAGTTCCTA TATTGATCTA TCAACGAAGA AGATGATCTT ATGTTTTCAC 
    TTTGTTCGAC ACATTCTTCA AAACAAAGTC GTATTTATAC AGCCGCAACA 
    ACAAGTGATA ATTAGGGTTT AGAATTTCTT TTCAAGGTTC ATAAATGCAC 
    TATGTCGCTG TCTCGTGACA TTCTTTTGTC TCTTCTTGAT TTTTCTCTTT 
    CTCTCTCTTA TTACTATCGA TATGTATTAG AACAACGTAA AGAAAAAGGT 
    ATGCATACAC AAAGATACGT CACGTTTGTG AAGTTGGATA CATTTACATT 
    TACATTCACT GCGTGAGGTC TTTTATGAAT TTCAATATCG TATTTTCATT 
    TAGAGTGCAT GCCTTTGCAC CACCTTCTTT TACTTCTAGT TTAATTTCTA 
    CACTTGTGCC ACTTCTTTGT TCTTAATTAC CGCGTGTCCT CACAAGAAAA 
    AATGGATTTC TTTTACTCTT TATTAACAGA TAATACACTG ATACATACAC 
    AAAGTAAAAA AACATTGAAT CGGACATATA CTGGTGGGAA AGGNTAAGTT 
    TGNATTGAGA TGTTTTACAG GTTTCATGGA TCGATGAAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1846595 [Map]; Strand: c
      • AT3G06120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1789-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGGTTCTTTG ACTCCTTGTT TCTACATCAA AAGGGTAAAT TTCATATTTA 
    TCTGTTCGAT CCCTTCATAG TCAATTAGCT AGTTTGGATG ATATAGAAAA 
    AAGAACTCAA TTCACAATCC TAATTATTTT CTCGAAGAGA TTGGTATTTT 
    TTTAATGATC GTTGCTTTCT TTTGTTGAAG TTATTTCGTA GAGGTTGATT 
    CAAGATTTAT TCCAATTTAT TTATACAGAC AATTGAACCT TCTCAAATTG 
    CTTATTTAAT AGGATC

AT3G06120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary
Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.
Computational Description
MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR