1. Home
  2. Mutant Lines
  3. 54-1837-2

54-1837-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22818576 [Map]; Strand: c
      • AT3G61670.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: -13; Region: promoter
    Flanking Genome Sequence: 54-1837-2 - 5-prime edge 
    CTCTCTCTCT TTCTCTGGGG GGTTATGCTT TGTTTCTTCT GCAAATNNCG 
    CTCCTTTCCA CACGGCACAG AGTAAGAAGT AGTATAAAAC ATCTCTCTCT 
    CTCTCTTTCA GAAAATAAAT GACNGTCGTT TTAGCAGCTA CCAACATTTA 
    TTGAAACGAC GGCGTTTTTT ACAGTGAGCG TTTTTACTGT AAGTTACTTG 
    GTGGTTATTT GTTTTCATTA TTCCTCTCTG AGCTGTGACG CAACCACCAC 
    AATGGTCCGT ATCTTCCTAA CGGCGAAACT CTCAGTTCCG TCTGCTTCTT 
    CTTCTACGCC GTTATTAGTA GTGTTTATGC TGATGTGTAC TTTTTCCATT 
    TTCACACACT CTTTTTTGTT TTTTATTGTT GTAAAATACG AAATGGTTGG 
    TTTTACTTTT TATCTTTTTT CAGTATGCAT TTTGAAACTT ATTAGTGGAT 
    TATGAAGAAA ATAAATAAGT TGGGGGAATT TTGCTTTTGC TTTATTTATA 
    ACAACCATAT ACATAATAGC TTTTCTTTAT AGCTTCTATG TCAGCGACCA 
    CTGAGGTAAA AAGAAAAGCA GGGTTTTGGC CTTTGTTAAA AGATGTGACA 
    GAATAAAGAT TTATAGCATT CATCAATTAC ACGAAATCAA AATGGCAGAG 
    AAAATTAAAA CAAAGTAAAG AAATGAAATG GCAAACAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22818692 [Map]; Strand: c
      • AT3G61670.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1837-2 - 3-prime edge 
    AGAGAGAGTT TCTCCCAACA AGATCAAACT TCGAACTCTA CGAGAACTAC 
    TATTATCCAA AACGCGAAAT AGAGAGACAG AGATTTCATA AATTTCTTAC 
    TTTTTAACCC CAAAGTTCTT TTCCAGACAG CGTTTTCTTC TGTCTTTTGC 
    TCTTTGTGGT TTACTCCTTC TTCCGGTTTG GATTTCCCGA GCTAGTAAAG 
    AAGGGATC

AT3G61670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3133)
Computational Description
Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT2G46380.1); Has 340 Blast hits to 282 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 17; Plants - 302; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR