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54-1858-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26267549 [Map]; Strand: w
      • AT5G65690.1 - [+] show detail - phosphoenolpyruvate carboxykinase 2
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 54-1858-1 - 5-prime edge 
    CGTGTGGTTA AGGATGATAC CACTGAGGCC GAACTCTGGT GGGGAAAGTG 
    AGTCACTTTC TATCTACATG CATTTTACAT ACATATTGAA GATCACCAAA 
    TTATATATCA AAATTTAGTA TATGTTTTTC TAGTTTTGAC ATTAAAAAAT 
    ATTAACTTCG TTTTGGTTAC AGAGGATCAC CAAACATTGA AATGGATGAA 
    AAAACTTTTT TGGTGAATCG AGAGAGAGCT GTTGATTACT TAAACTCCTT 
    GGACAAGGTA ACTTGACGTA GACTATATTC AAAATGAGAT TGTAGTTAAA 
    TTTCATAGAC TATATATTAA AGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26267433 [Map]; Strand: w
      • AT5G65690.1 - [+] show detail - phosphoenolpyruvate carboxykinase 2
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-1858-1 - 3-prime edge 
    ACCACACGCT TGTCTTTAGG AGACCGACCG GTTTTGGCTC CAGACAATGT 
    AGCCAACGCA CCGGTCGATG TCACAAACGA TCCCTTCTCA AACTTTATCG 
    CTTGCTCGTA CAACTCTGCA ACCATAAAAA TTCGGAAGGT GATGAGAAAA 
    CATGAAACAA CATTAAAAAT AGGGCTCTTA GTTAAAACGG TGGCGTTTTA 
    GGGATGTATT ACCGGCGGGA GAGAGGTTGT GAAGGATGTG AGTGAACTTC 
    AAGCCACTGT CGCTGACGTC AGCAGCCGGA AGTGACGTAG GAGTCACTGG 
    CACGTGTGCT ACTTTAGCTG CCGAAGTCGG ATCTCCTCTT ATTAACTTCG 
    GTCCTGTCTC TCTCGTCAAC GAAGCCAACG ATGCACTGTC CAATATTTCA 
    CCAAATTATG CATTCGTATC ATTGTTTTCT CAAAATTCAT TTTTTTATTT 
    TTATTTTTAT GATTGCATGC AAAACTAAAC AAAATTCAAT CATACGATTA 
    TGAGAAACCA CTATATATAT CATTACGCTA TTTCACATGT TTAATCTTCA 
    AATCAAAGAT C

AT5G65690.1

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxykinase 2
Curator Summary
Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
Computational Description
phosphoenolpyruvate carboxykinase 2 (PCK2); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: gluconeogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, male gametophyte, root, flower, trichome; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 1 (TAIR:AT4G37870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR