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54-1910-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6357540 [Map]; Strand: w
      • AT3G18510.1 - [+] show detail - unknown protein; Has 15 Blast hits to 15 proteins in 9 species: Archae - 0; B...
        Distance: 1387; Region: intergenic
      • AT3G18518.1 - [+] show detail - ROTUNDIFOLIA like 20
        Distance: -2595; Region: intergenic
    Flanking Genome Sequence: 54-1910-1 - 5-prime edge 
    CCTACATCTA TGTAGGAAGG AAGTCTCTAT CCTTCCTTTT CATAAGCATC 
    CCTTTCCGTT GCTATATAAT TACCCAAACA TTACAAAAAA TTATATAATT 
    TGTAATATCA TGACAAATGT TATGCTATTA CNTTAGTATT TAAAAATGAT 
    ATATTATGCA ATTACCCTTC TCTGAGCTCA TGTTACACGT AAGATTAGGA 
    AAATGCGAGG TTAATGTGTT TGTTATACTA AAGCCAGTAA GGTGGCAAGG 
    AAAAAACAAA AAAAAATATC CAATGCAGGG CTATGTCCCT ACATATATAA 
    CTATTTTGNG GANATCCANA AATTTAAGGT TTGTATTGAG TGTTTGCCAA 
    AGAAATAAAG GTTGTAATGA GTGCAACAGC CAACAGGCAA NAAATGTCTT 
    GTCTCCGTGA ACTTCACGTG CATGGNGCAT CCCCTACCCG TTGCCATTTC 
    GTGAANATCG TAATTAAGTT TGATTACTTT CTCAATTATG ATTAAAAAAG 
    ATGTGATGGA TTCGACCTTT CACTTCCTTA CGTTGAAAAT ATATAACCCA 
    TGTGATTTCC CACTTTTTAT GGAAAATGAT ATATACCACT TAAATTGACT 
    CTTCTCTTTT TTTCCTACGT AAGANATAGT TGAATCTTAA AAGTTTTTGT 
    TTTTTAGTTT ACAAATTTTA NATCCTGAGT GTACCAATAG ATTTAAACCG 
    GAT

AT3G18510.1

Model type
Protein coding
Computational Description
unknown protein; Has 15 Blast hits to 15 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18518.1

Model type
Protein coding
Short Description
ROTUNDIFOLIA like 20
Curator Summary
Member of a family of small polypeptides found only in angiosperm lineages.Contains a conserved 29 amino acid domain (RTF or DVL domain).
Computational Description
ROTUNDIFOLIA like 20 (RTFL20); CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR