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Mutant Lines
54-1984-1

54-1984-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 26439420 [Map]; Strand: w
- AT5G66140.1 - [+] show detail - proteasome alpha subunit D2
  Distance: -656; Region: promoter
- AT5G66150.1 - [+] show detail - Glycosyl hydrolase family 38 protein
  Distance: 0; Region: intron23 (CDS)

GAGGTACGTA CAGTTAGATG TTCTTGAATT GGGATATACA TGACAGTAAT 
TGAGTGTTGA GCGTTGCTTA CAGGCGGGAG AAGACAATGA TTACTCTAAA 
ATCGCTAAAG TTGAGTTGAA GAAGTTGTTT TCCGGAAAAA TGGTAAGAAA 
CACACNTTGC TCATCTACAT GTGGAGAGAT ACTCTAACAT ACTAGCTAGC 
TAGGTGGTGA ATGAATCCAT ACTATTTTTG CAGATCAAAG AAGTGACGGA 
AATGAGTTTG TCAGCAAATC AAGAGAAAGT AAAGATGAAG GAGAAGATGA 
AGTGGAAAGT GGAGGGTGAA GCGGAACAAC CTTCTTCCCC GCTAAGAGGC 
GGACCCGTTG ACAAGTCGAC TTTAGTAGTA GAGCTTGGTC CCATGGAGAT 
TCGTACATTT GTGGTTCAGT TTTATCAGAA ACAACGTAGA AGAAGAAAGT 
TGTTTGTGGG ATGATTGCGC CAATATGTTT GTACAATGTT TTAAATCATT 
CATTCATCAA CGGTTTGGTT AGTTAGAAAG CGCGGGAGGA AGGTTCATGT 
ATTTTTCAAT CGACCATTAT ACTGTGTTAA TGGGCCTGTT ATTGGAAGTT 
TTGGGTATAT AAGGCCCATT TAAAGGAAAT GATGAGTGCG CCGATTTGTC 
TCTCTTCTCA AAAACTTGAA GATCTGAGTA GAGTACTTCC TTCTTCTTTT 
TTTTTTTTTT TTTTNNNGN

AT5G66140.1

Model type: Protein coding
Short Description: proteasome alpha subunit D2
Curator Summary: Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.
Computational Description: proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66150.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family 38 protein
Computational Description: Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR