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54-2006-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16189054 [Map]; Strand: w
      • AT2G38720.1 - [+] show detail - microtubule-associated protein 65-5
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-2006-1 - 5-prime edge 
    GTTCTGGTTC AGAAGTTGAT GAAAGTGACT TGACACAAAG AAAGTTGGAT 
    GAACTTAGAG CAGATCTGCA GGATCTTCGA AATGAAAAGG TGTTCTTACA 
    CACACACACA CTGTNNAAGN GATTGTTNTA AAATGTNTGT AGNTATTNGC 
    TTATCATCTN TATTTCAATT TCNNGCTGTT CGACTGCAGA AAGTANACTC 
    TTATATCAGN GCTGNCCATG ANCTGTCAGA GATTCTGTCT TTNGATTTCT 
    CCANGGCCCT GAATAGTGNN CATAGCAGCT TGACTGAGTT TTCAAAGACT 
    CATTCNAAAA GCATTAGTAN TGATACTCTN GCTNGGTTCA CAGAACTTGT 
    AAAGTCTCTG ANGGCGGANA AACATGAGAG GCTGCTTANG GNGATAAAAA 
    AATNACACTT NTGAAGTGTA TATATACATA TATTATGNGG TTTCTCATGT 
    CTTACCAGTN ACCACTGCNC TTGAGCANTG AGCACAGTNG CATTCAATTA 
    NAAAATGCAG TTTTTATTGG TAGCCTACTA TTTAACCTGG CNCTATTTCT 
    CACGGAAATG AATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16188952 [Map]; Strand: w
      • AT2G38720.1 - [+] show detail - microtubule-associated protein 65-5
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-2006-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTAGACGTTA TAATCATTCC CTGCTATGTT 
    AGACGTGATC TCTGCTATTT GATTCAGTGT CTCAGAGAGC TCTTTCCTTC 
    TTCGATCCTT TTTCATCAGT AGATCTTCCA GTACAGGCTT TACACTGGAA 
    ATCTGCTCCT TCAAAGAGCC TTCTTTCTTC TCAAACAAAA ACAATAACAT 
    ATATCAGACA TTATATAATA CTCTCTATGA GACAAACATG TAGTATTGCT 
    AAGAGTATCT TACCTTGGGA AACGAAACTT TTTCACCAAG CGCAGACATG 
    AGGCTGGCAA TCTCAGCTTC AGCTTGAGCT AATGATCGCT GTAACTCAGC 
    TCTGAACTTA CGAGTTTTCT CAACCTTCTT ATTGTATATA TCCAGACATT 
    CCTGCTCAAG TTCTAGCAGC ATCTTATCTC TTTCATTGTA ACTTTCACCA 
    ATCTCATCCC ATATTATCTA CATCCGAATA AAACCAGTGG TAAACATCAC 
    CAGCTCAAGT TTTTCCTCAA TTGACACAGA ACAAGACATT ATCATTAGTA 
    GTATCCTAAT CCTGATTTCG ATTATTGCTC ATACTAAAAC CATCCCAAGA 
    AAAAGTAGAG TACACGTCTT TCACAGGAAA ACCTAAAACT GTAAGCAAAT 
    GTAACAGCGG AGGCATAACT CAAAATGGCC TGAAATCGAA TCTAACTGAC 
    AGTGATCAGA AGCATAAACC CTATAAAATC AAAATTCGAA ATTCAAATTG 
    CGTTACCCAA CG

AT2G38720.1

Model type
Protein coding
Short Description
microtubule-associated protein 65-5
Computational Description
microtubule-associated protein 65-5 (MAP65-5); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 9645 Blast hits to 7381 proteins in 767 species: Archae - 226; Bacteria - 1139; Metazoa - 4615; Fungi - 969; Plants - 706; Viruses - 30; Other Eukaryotes - 1960 (source: NCBI BLink).
Link
InterPro Scan - TAIR