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54-2086-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26455367 [Map]; Strand: c
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2086-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCACTCCC TTGTCTTAAA GTGCCGAGCC AATGGCCTCA 
    TGAAGCGAGT TTTCACCATC ATCCCCGCCG CCGCGTTCCG GAAGATGTCT 
    GGTCAGTTGG AGAACTCTAT CGGAGACGTT TCCTGGCTCC TCCGTGTCTC 
    CGCTCCGGCG GAAGACCGTG GTGACGCTGG CTACCTTGGT CTTCCACCAA 
    TCGCCGCCAA CGAACCCATC CTTTGCCTGA TCTGGGAGCA GATTGCCATT 
    CTCTACACCG GATCGCTTGA AGACCGCTCC GATGCCGCCG CCTCGCTGGT 
    ATCTCTGGCC CGTGACAACG ATCGCTACAC GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26455378 [Map]; Strand: c
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2086-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCCTTCTCA AGCATCTGCT CCGTGTCGTC GATGATACGG CGAGTGGGTC 
    GCTCGTAAAG GTCGTTGCTG GCGCGGGCAG CCTGACGGAG AAGACCGGCG 
    AGCTTCTCGG TCTTAGCCTT GAGTTCGCCG CACTCTTGCT TGAAGGAACT 
    AGCCTCATCG GCGGCTTTGA CCACCTGGTC AGACAGTTGA ATCGGCTTCG 
    CTAGGATTTG CTTGACGATG TCTGCCATCG TCGATATCAG ATCAAATGGC 
    GAATCGAGAT TCAGAAACCC GAAAGAGAAA GGACTAAACT TTGAGGAATT 
    AGGGTAAAAA GGATAAAGCT

AT5G66200.1

Model type
Protein coding
Short Description
armadillo repeat only 2
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR