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54-2089-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22373435 [Map]; Strand: c
      • AT3G60530.1 - [+] show detail - GATA transcription factor 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2089-2 - 5-prime edge 
    GGTGGAAGAA GGAAAGCTGA AAGGGTTTTC GGAAGAAGCG GCGGAGGAAG 
    CCGGCGGAGG AAGTGACGGT GGAAGAGGAA GAGAAGATTT CGTCGTTGGA 
    GAAATCGAGA AGGTCGTCGA TACGAAGCAA GTCCGGTGAA GACATGCCGT 
    AGACGTCCAT TGTTGACTCG GACTCGCTTA CTGAGTATGT TTGTGGTCAC 
    TGGTTCAGAG GTTTAATATA GAGAGAGAGA ATTAGTGTAA GTGAGGAAAG 
    AGACGAAGAT GAGAACGTGC ATAGAGTTAG CATGCACCGA GACTGACCTG 
    ACCACTCCCT TTTTTTCTAT TTATTTATCC ACTTTAATAT ATTTGTCTAC 
    ATTTTTCTTT GAACATGCAT GTGCTATTTA ATTTACTTAC CAGAGGATTA 
    ATTAACCATG AATTACATAA TGCATATACT AGTCTTTTTT TTAAAACGCA 
    TATATTATAG ATCGAGCTTA TATTCTAAAC AAGCATTTTG AAAACATTTC 
    TTTCAAAACA GGCACTCTAA ACAGTAAAAG CATATAATAA CTCCAATTCT 
    CATTGTTACA GACATTTTTG CCCTTACACT ATGAGCTGGA GTTGAGAATA 
    AGGTGAAAAA AATGCGTTTA TCTTCTAAAA ATTGTATCCC CATCTCTGAT 
    TCAATTTTAA GTTTCTTTTG ACATTCAGAG ATATATGGCT TANATAGTGG 
    A

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22373551 [Map]; Strand: c
      • AT3G60530.1 - [+] show detail - GATA transcription factor 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2089-2 - 3-prime edge 
    CTTCCACCTA CACTTCTCCT ACTCTCCTCA CCGACTTCAC TCACGATCTC 
    TGCGTTCCCG TACGTTTTCA AATTTCAATT TACCCTAATT TTGATTTTGA 
    TTTTGAATTT CTAAGTTCTG ATTTTGAGTT TTGCAGAGTG ACGACGCAGC 
    TCATCTCGAA TGGTTATCGC GATTCGTTGA CGATTCATTC TCCGATTTCC 
    CAGCGAATCC TTTAACCATG ACCGTTAGAC CCGAGATTTC ATTCACCGGA 
    AAACCTAGAA GTCGCCGATC AAGAGCACCA GCACCTTCCG TAGCTGGAAC 
    TTGGGCTCCG ATGTCTGAAT CAGAGCTTTG TCACTCCGTC GCTAAACCTA 
    AACCGAAGAA AGTCTACAAC GCTGAATCGG TTACGGCGGA TGGAGCGAGG 
    CGGTGCACGC ACTGTGCCCT CGGAGAAAAC GCCACAGTGG AGAACTGGAC 
    CGCTTGGACC TAAAACACTT TGTAACGCTT GTGGAGTTCG TTACAAATCA 
    GGGAGGCTTG TACCGGAATA CAGACCGGCG TCGAGTCCGA CGTTTGTATT 
    GACTCAGCAT TCGAACTCTC ATCGGAAAGT TATGGAGCTC CGGCGACAGA 
    AGGAACAACA AGAATCTTGC GTTCGAATT

AT3G60530.1

Model type
Protein coding
Short Description
GATA transcription factor 4
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR