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Mutant Lines
54-2139-1

54-2139-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26438931 [Map]; Strand: c
- AT5G66140.1 - [+] show detail - proteasome alpha subunit D2
  Distance: -167; Region: promoter

ATGTTTGTAC AATGTTTTAA ATCATTCATT CATCAACGGT TTGGTTAGTT 
AGAAAGCGCG GGAGGAAGGT TCATGTATTT TTCAATCGAC CATTATACTG 
TGTTAATGGG CCTGTTATGG AAGTTTTGGG TATATAAGGC CCATTTAAAG 
GAAATGATGA GTGCGCGATT TGTCTCTCTT CTCAAAAACT TGAAGATCTG 
AGTAGAGTAC TTCCTTCTTC TTTTTTTTTT TTTTTTTTTT NNGTNNNGGG 
NNNGCCNAAA AANNGGGNNT NCCTTTTTTN NNNNTNNCCC CNGAAACNAA 
AACCAAAANN AAAANNGGGN AAAAAAANGG GTTAAANCNA ANNNNNNNTT 
TNNNNTTTTN CCCCCCNNGG GNCCCNTTTT NAAANAAAAA NCCCCCNTNA 
ANCCCCCCCN ANGGGGAANC CCCCCCNNGG GNNCCCNGGN CCCCNNCCCC 
NNNTNCCCCC CCNNAAAAAA AAANCCCCCC CCAAATTTNC NNCCCGGGNC 
CGNAANCNCC NNNNNNTTNT AAAA

3 prime edge [+] show sequence

Chromosome: 5; Position: 26439047 [Map]; Strand: c
- AT5G66140.1 - [+] show detail - proteasome alpha subunit D2
  Distance: -283; Region: promoter
- AT5G66150.1 - [+] show detail - Glycosyl hydrolase family 38 protein
  Distance: 0; Region: exon25 (CDS)

ACAAACATAT TGGCGCAATC ATCCCACAAA CAACTTTCTT CTTCTACGTT 
GTTTCTGATA AAACTGAACC ACAAATGTAC GAATCTCCAT GGGACCAAGC 
TCTACTACTA AAGTCGACTT GTCAACGGGT CCGCCTCTTA GCGGGGAAGA 
AGGTTGTTCC GCTTCACCCT CCACTTTCCA CTTCATCTTC TCCTTCATCT 
TTACTTTCTC TTGATTTGCT GACAAACTCA TTTCCGTCAC TTCTTTGATC 
TGCAAAAATA GTATGGATTC ATTCACCACC TAGCTAGCTA GTATGTTAGA 
GTATCTCTCC ACATGTAGAT GAGCAAGTGT GTTTCTTACC ATTTTTCCGG 
AAAACAACTT CTTCAACTCA ACTTTAGCGA TTTTAGAGTA ATCATTGTCT 
TCTCCCGCCT GTAAGCAACG CTCAACACTC AATTACTGTC ATGTATATCC 
CAATTCAAGA ACATCTAACT GTACGTACCT CGTAGAGATG AGCCAGGCGA 
AGAAGGACGT TCCCGAGATC CAACTCCTCA AGAGTGATGA GAGCAATGTT 
TTGAGGCAAG GTGTAGAGAT GATCCATGGC ATAACCTTTC ACAGTATTTG 
AGGCTTTCCA TTTCTCCTTG TTCTCGTGTG CGAATGCCAT TAGAAGANGT 
GAGTATATTT CCTGTCCAGT CTCTCGTCTN CACCGNCCAC CTTCTCCTAC 
CTTATTTATG CTTACATAGT A

AT5G66140.1

Model type: Protein coding
Short Description: proteasome alpha subunit D2
Curator Summary: Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.
Computational Description: proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66150.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family 38 protein
Computational Description: Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR