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54-2147-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26450423 [Map]; Strand: w
      • AT5G66180.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66180.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66180.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 54-2147-1 - 5-prime edge
    CNTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCAG GCAGGTGAAA AGTCCAATCA CAATAAGCTC
    TCTGTGCTCT TGCCTCTCCT TTTTTCTATT CTTTTAGACG TGAGTCAGTG
    ATCTAAGTCG TGTAACTATC AGTTTGACGC ATGCCCAAAA CGAAGATGTG
    GTGGATCAGT TCCTTTCTGA AAATTTCTCT GCAGGTACTT AAAGTATATT
    TTCAACAAAT TAACAACATT CATTGTGGTA CCGTTTTCGA AAAAAAACTC
    GATACTTTGT AGGTGCTATA GGTCAGATTT TGTGTGATTT TGTATATTTC
    TTGTTCCTTA CTTATGGACT AGTGGGAAGA CTAACAGAAA ACTGGGTTAT
    GACGATGCAG AGCTACAAGA GATTGAAATG GCCAAGGATT GGCCGTGTAG
    AAGTGGTCGC ACGCCTAAGA CACTGCGGTT TGATCCTTCC ACCTCAGCAA
    CCAGCGGCCT TTTCGTTGCA AAAATCAGGA AATTGCCACC CAACGAAGCA
    AAGAAGAATG TGTTGTGATA CCTCGCTCAA AAGGGTCGTT CGGTTGATGA
    CTTTACTGAA AAGTGATTTA GCCCTTCAAA AAGGGAGATG AGAAAAACAT
    ATTTCACAAA ACTCACTATA TTGTTGCAAG AAATATAACA TGAACAACAA
    GTGAGAAAGA GTAGTTTGGT GGTATTGATG CTCTCTTTTG AATGTTTTGA
    TTGAAAATCC TTGAGAAAGA AAAAAGAAGC AGAT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26450374 [Map]; Strand: w
      • AT5G66180.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66180.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66180.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 54-2147-1 - 3-prime edge
    CCTGCAGGTG CTGTACACTA GAGTGCCAGC TTCTTTCAAC AATCTGAATC 
    CATTTCTCAG TAGATTCAAC TGCAAACAAA GGCCCTGGCA ATGATCACCA
    GAGAGGCAAT AACAAGGGTA GACACACGAA ACACCAACAG ACTTATGGAA
    TGTACCTGAA GAGCTTTTAA GTTTGTATCG GTTCTCTCAG CATCCAGAAC
    ACGGCGTTCC AGAGTTTTCC AACCCCATTG CTCAAATTTC TGGATATGTT
    TGATCGAACC ATCGTGTGTG CACTCTGCGT CCACAAGAAC CTGCAGATTT
    CCACTTCAAA TCTTTAGTTA TGTCACTTTT AAGTGACTGT AGCTGCATCC
    GCGGATCACA ACTATACCTT ATCATACCCA TAAGATGCAT AATCATTTTG
    GTCAAGGGAT CTATAAAGTT CATTCTTTTT TAGCCCGATT ACTCCAGAAC
    CCTGTCCGTA GAAAATAATT TCTGCCTGTC CATTCTGCGG CAAAACAGAA
    TT

AT5G66180.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8827 Blast hits to 7075 proteins in 2181 species: Archae - 455; Bacteria - 6424; Metazoa - 542; Fungi - 251; Plants - 202; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 2637 Blast hits to 2540 proteins in 1031 species: Archae - 209; Bacteria - 1812; Metazoa - 180; Fungi - 59; Plants - 92; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.3

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8458 Blast hits to 6982 proteins in 2152 species: Archae - 444; Bacteria - 6084; Metazoa - 538; Fungi - 249; Plants - 190; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR