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Mutant Lines
54-2253-1

54-2253-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 25775566 [Map]; Strand: c
  - AT1G68650.1 - [+] show detail - Uncharacterized protein family (UPF0016)
    Distance: -175; Region: promoter
Flanking Genome Sequence: 54-2253-1 - 5-prime edge
```
CTTCCGGTAG AGAAGCTNCT GACANCGGAC NTGANNCATA CANAGNGTNG 
NGTTCATTTA TTATTGTTCC ATTGTTGCTC TATTACCAAC TTTAGGAGAC 
AAGAAGAATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 97594 [Map]; Strand: c
- AT4G00231.1 - [+] show detail - ARM repeat superfamily protein
  Distance: 0; Region: exon1 (CDS)

ACCGGAAGAG GTGCTTCAGC CGCTTCTACA TGCTTCAGAT TTATCATACT 
CTCTAGAAGA TTGCTTGAAG TTTCTTCTAG AGTCTTCCAA GACCGACTCA 
GGCCGTTCCG ATCTCGCTTC CAAGTCTATA CTTCCGTCGA TCCTCCGTCT 
TCTTCAGCTT CTTCCATACC CATCTTCCCG CCATTATCTA AACCTCTCTC 
TGAAGGTCCT TCGAAACCTC TGCGCAGGTG AGGTTTCGAA TCAGAACTCT 
TTCGTCGATC ACGACGGTTC TGCTATCGTC TCCGACTTGC TTGATTCCGC 
CATTGCAGAG AAAGTAACGG ATTTCGAGAC AGTTAGGTTC GGATTACAGG 
TTTTAGCGAA CGTTGTGTTG TTCGGAGAGA AACGTCAGAG AGATGTGTGG 
CTCCGATTTT ACCCGGAGAG GTTCTTATCA ATCGCTAAGA TTAGGAAACG 
TGAAACATTT GATCCTCTGT GTATGATTTT GTATACTTGC TTTGATGGAA 
GCTCAGAGAT TGCTTCAGAG CTTTGTAGCT GTCAAGGGCT CACTATCATC 
GCTGAAACTC TACGGACTTC ATCTTCCGGT AACACTCTTA TTCCTGAAGC 
CAAAAATGTC ATTTTGATGT TAAAGTCGTG ATTTTTATCT GATTTGAGCC 
AATCTTGTTA TAATTGTTTG TAGTTGGGTC TGTGGAGGAT TATTGGCTCA 
AGTTATTGGT TTCN

AT1G68650.1

Model type: Protein coding
Short Description: Uncharacterized protein family (UPF0016)
Computational Description: Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 1855 Blast hits to 1773 proteins in 684 species: Archae - 37; Bacteria - 1050; Metazoa - 159; Fungi - 141; Plants - 212; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00231.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: maternal effect embryo arrest 50 (MEE50); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Ataxin-10 domain (InterPro:IPR019156), Armadillo-type fold (InterPro:IPR016024); Has 293 Blast hits to 290 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 110; Plants - 41; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link: InterPro Scan - TAIR