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54-2282-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2924659 [Map]; Strand: w
      • AT3G09520.1 - [+] show detail - exocyst subunit exo70 family protein H4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2282-2 - 5-prime edge 
    ATTCCCGGAG ATCATTAATA CTAAAACTAG CAAGAAACAC TCTCCGCCGG 
    AGAAAGTTTT CCGGCTGCTT GACATGTACA CCGCCATCGC CGGAAACTGG 
    CAAGCAGATT GAGTCTATCT TCTCGTTTGA TTCGATCTCC GTCGTCAGAT 
    CTCTTGCTCT TAAATCTCTA ATCTCTCTCA GCGAATCAAT TCGATCACTA 
    CTTGTGGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2924591 [Map]; Strand: w
      • AT3G09520.1 - [+] show detail - exocyst subunit exo70 family protein H4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2282-2 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GGGAATCCAA AGAGAAGAAG CGCACCGTCT CGAGAGATAT CACTAAAGCA 
    AGACTCTCTA ATTGCGTCAG AGGATTCAAA GACATGATCA CACAAAATCT 
    TCTCACCTTT GAAAAGAGTC TCCATAGAAA CTTTGACTGC TTTTAACCAG 
    CTTCTGATCT TCAACTCCAT AACTTCCCAT GACATTTTCT TCACCTTCCC 
    AGTACTCGTC TTCTCCACTT CTAAACGATA AATCCCTTCG TCGATGATCG 
    ATTTCCTAAT GCTTTTATAG ATGCTTAGAC ACTCCTTAGC GTAACCAGAA 
    CCGATCATGC ACTCAGCGAT GGATTTCAAA TCCGTCATGA CGTTGGTAGA 
    AACCTCCTCC AGTTCGATGA TCGTATCTAG ATCTTCGACA TAGTCGGGGA 
    AATCTGAGTA GCTAGATCTT GCGGAAGTAA GTGAAGATCG AGTGGACACT 
    GATTCTGGAT CAAGATAAGC ACGATTCATC GAAAGAATCT GGTAAAACTC 
    TTTTTGCAAC CTCTTCATAG CGATTTGCAT AAGCT

AT3G09520.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H4
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR