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Mutant Lines
54-2463-1

54-2463-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26439067 [Map]; Strand: w
- AT5G66140.1 - [+] show detail - proteasome alpha subunit D2
  Distance: -303; Region: promoter
- AT5G66150.1 - [+] show detail - Glycosyl hydrolase family 38 protein
  Distance: 0; Region: exon25 (CDS)

CAAACATATT GGCGCAATCA TCCCACAAAC AACTTTCTTC TTCTACGTTG 
TTTCTGATAA AACTGAACCA CAAATGTACG AATCTCCATG GGACCAAGCT 
CTACTACTAA AGTCGACTTG TCAACGGGTC CGCCTCTTAG CGGGGAAGAA 
GGTTGTTCCG CTTCACCCTC CACTTTCCAC TTCATCTTCT CCTTCATCTT 
TACTTTCTCT TGATTTGCTG ACAAACTCAT TTCCGTCACT TCTTTGATCT 
GCAAAAATAG TATGGATTCA TTCACCACCT AGCTAGCTAG TATGTTAGAG 
TATCTCTCCA CATGTAGATG AGCAAGTGTG TTTCTTACCA TTTTTCCGGA 
AAACAACTTC TTCAACTCAA CTTTAGCGAT TTTAGAGTAA TCATTGTCTT 
CTCCCGCCTG TAAGCAACGC TCAACACTCA ATTACTGTCA TGTATATCCC 
AATTCAAGAA CATCTAACTG TACGTACCTC GTAGAGATGA GCCAGGCGAA 
GAAGGACGTT CCCGAGATCC AACTCCTCAA GAGTGATGAG AGCAATGTTT 
TGAGGCAAGG TGTAGAGATG ATCCATGGCA TAACCTTTCA CAGTATTTGA 
GGCTTTCCAT TTCTCCTTGT TCTCGTGTGC GAATGCCATT AGAAGANGTG 
AGTATATTTC CTGTCCAGTC TCTCGTCTNC ACCGNCCACC TT

3 prime edge [+] show sequence

Chromosome: 5; Position: 26438951 [Map]; Strand: w
- AT5G66140.1 - [+] show detail - proteasome alpha subunit D2
  Distance: -187; Region: promoter

TATGTTTGTA CAATGTTTTA AATCATTCAT TCATCAACGG TTTGGTTAGT 
TAGAAAGCGC GGGAGGAAGG TTCATGTATT TTTCAATCGA CCATTATACT 
GTGTTAATGG GCCTGTTATG GAAGTTTTGG GTATATAAGG CCCATTTAAA 
GGAAATGATG AGTGCGCGAT TTGTCTCTCT TCTCAAAAAC TTGAAGATCT 
GAGTAGAGTA CTTCCTTCTT CTTTTTTTTT TTTTTTTTTT TNGGTNTNGG 
GNNNGNCCAA AAANNGGGNN TNCCTTTTTT NNNANTTNCC CCNAAAANCA 
AAACCAAAAN NAAAANNNGG NAAAAAANNG GGTTNANNCC AANNNNCNNT 
TTNTNNTTTT NCCCCCCNNG GGNCCCCTTT TTAANNNAAA ANCCCCCNTN 
AANCCCCCCC CANGGGGANC CCCCCCCCNG GGNNCCCNGG GCCCCCCCCC 
CNNNNCCCCC CCCCNAAAAA AAAANCCCCC CCCAANTTTN CCNCCCGGGN 
CCGAAANCCC CGGGGNNNNN TNNAA

AT5G66140.1

Model type: Protein coding
Short Description: proteasome alpha subunit D2
Curator Summary: Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.
Computational Description: proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66150.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family 38 protein
Computational Description: Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR