Home
Mutant Lines
54-2487-1

54-2487-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 23430203 [Map]; Strand: w
- AT3G63450.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -1049; Region: intergenic
- AT3G63460.3 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: 439; Region: intergenic

CNGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCA TCTCTCTACG TCAAGTAATT TGGTGGTAAC 
GTTTTTGGGT CCATAAACAT ACATTCTCTA TTATATGGGC CTACATTCTC 
TCGCTATATG GGCCTGTTTT ATACAACCCA AAGGTTTTAT ATTTTCATCG 
ACAAGGCCTG CTGCAACCAC ATTGATTTGT CATGTCGCTT TCGTACCATC 
ATCTTTTACA TCCAGTTTCT TCAATACTCC TTTCCTTATT GTCCTAATCA 
AAGTAATAAT ACCTATAATG TACATTCGAA GGATGAGGCC CTCGTAGTCG 
TGGGGGATGA TGTCTTTCTT CCTCCTACAT GGAATCTGCA CCATGGCCGA 
GATCGACCTC AAAAAGGCCA TGATGGTGAC TGGCACGTTT CTTTTAAAAG 
TTTGCTCAGC GCGTTCTAGG ATACTCCCGC TACCCGTGTC TCCCTTTTAT 
TAGTAAGAGA TTCTGGCGGA ATATTTAGTT GTTGCTCAAC AATATTTTAT 
AAATGCTACT TTTTGCTTAA TCCATGTTTC AAATATGACA AGAAAAACAA 
AGAGCGTAAA AATCTAACAA AATTCGTAGA AAGAAAGACG AACAAACTTG 
TCCGGTAAAG TAACATCCAA AAACATGAGA ATGTTTCAGC AATCTGATGA 
TCTCTATACT ATCTAAACAA AAGAGTAACT GGAAGTAGCA GATGAGGTTC 
ATAAATGACA AAAAAAAAAA AAN

3 prime edge [+] show sequence

Chromosome: 3; Position: 23430198 [Map]; Strand: w
- AT3G63450.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -1044; Region: intergenic
- AT3G63460.3 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: 444; Region: intergenic

ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
CCGTTGCTTA AAAAAGTATG ACTTATGTGC GAGAGTCTGA GAGAGACAGA 
GACATTAAGG CATTGATTGG AACGTCGTTG ACTGAGAACA CACATTGTGT 
TGTGATGACT GATGACTTGA AATTCGAAAA AGTAAGTTAA GTGGGGAGAG 
AGAGAAAGAG AGCTCAACCT CAATTGTGGG TTTTGAAACC CAATGTAACT 
AACCTACTAA TAAGAGTTGC TGCAGTGCAA TCCAATGCAT GTGAGAGATC 
ACTGGCGCGT GAGAATCACA CTGACCCAAT CGCTACGTGT GGATTTTGTG 
TGTAAATGGA GATGTCAGAG AGGGTTGAAA GGAAGAGAAC GTGCAAATGC 
AATAATACGA TTTCTTCTGA CTACTACTTT TGATTTACAA AAGAAAAAGG 
AGTATTTACA TATATTGAGG GTGCGGGCCG TATAACTAAC TCTTATCGAC 
GTCATTATTT TTAACATTCA TCATTTGCAG CTTTATGTTT TTATCAATTT 
AACCAAGTGT TTTGAAAATA ATAAAAATTG ATCCTTGAGT GTATATATAT 
GATAATAAAA GAAAACTTTA CTGCGATAAG ACTTGACTAT TGGACCCATA 
TACATGTATC TTTATAACTT TTGAGTAATT CTTTTATTTT TTAAAAAGGA 
GAAGCATTTT TAACACCAAA GCCACCGGTG ATCAGCTCAA TGATCGTATA 
CGCTCAATAA TCAAACTN

AT3G63450.3

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2).
Link: InterPro Scan - TAIR

AT3G63460.3

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1).
Link: InterPro Scan - TAIR