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Mutant Lines
54-2494-1

54-2494-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 26350023 [Map]; Strand: w
- AT5G65860.1 - [+] show detail - ankyrin repeat family protein
  Distance: -979; Region: promoter
- AT5G65860.2 - [+] show detail - ankyrin repeat family protein
  Distance: -967; Region: promoter

CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATAGT CTAGAGCTAG GGTTTCATTG AACTTTTTAT 
GGGCTTATAA TTATTCGACC TGTTACATAA ATGGGCCTGT ATTATTGGGC 
CTTTATTAGT TCAGAGTTGT AATATACTGC NGAANGCGNG NTCTACAGAA 
TTANCCTGTG ACCACNTCNC NATGATTNNT CANCCATTNC NCTCNGATAA 
ANNGGACACN ATGACATGTG ACTNCTGAGA ANNGAGATAT ANAAANCACT 
GTGTCTATGA CGACGNTNTC NTCTCTCTCT GTNTTATTTT NATCATACAC 
ANCATATAGT GGTGNGCACA CATGNNCACT NTTTAAAANA GGGGGGATGN 
GATAANAAAN AAGGGGNCCT CGNNGTGAAA AAAACATTCT GCAGAAAAAA 
AAAAAAAAAA NNNGGTCTNT AAAAAAANAA AAAANNGGCG NGNGCNCNCA 
AAAAAANTTN CACACNGGGN GGNGGTTNTN TTTTTTTTTT TTANAAAAAA 
ANAGGGNGGC NTCCCCNANA AAAAAAAAAG NNGNGTTTTT TTTTTTGTGT 
GGGGGGNGGG GGNAAAAAAA AAAAAAAAAA AAAAANNGNG GGGGGNCCNN 
NTNNGGGGGN GGGGGGGNCN ACNNNNANTT TNNTNTTTTT NNGNGGGGGG 
GGNNNNCCNN AAAAAAAAAA AGGGGNGGGG TTTTTTNNGG GGGGGGGGGG 
GGG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26419435 [Map]; Strand: c
  - AT5G66055.1 - [+] show detail - ankyrin repeat protein
    Distance: -171; Region: promoter
  - AT5G66055.2 - [+] show detail - ankyrin repeat protein
    Distance: -171; Region: promoter
  - AT5G66060.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -46; Region: promoter
  - AT5G66060.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -46; Region: promoter
Flanking Genome Sequence: 54-2494-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
CTGCTTCTTT CGAATCTCGC TCGGCCGGAT CTCATCCTTG TTGCTAAAAT 
GATGGCGAGA CAGAGGAATC ATCGTCCTTC AGCTCGTAAA TCCTCGCATT 
CAACGCTTGT ATTCGGCGTA TTGATCATGT CTACTTTCGT GATTTTGATT 
CTTCTCGCCT TTGGAATT
```

AT5G65860.1

Model type: Protein coding
Short Description: ankyrin repeat family protein
Computational Description: ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65860.2

Model type: Protein coding
Short Description: ankyrin repeat family protein
Computational Description: ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 14669 Blast hits to 7820 proteins in 738 species: Archae - 65; Bacteria - 1760; Metazoa - 7798; Fungi - 1170; Plants - 439; Viruses - 38; Other Eukaryotes - 3399 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66055.1

Model type: Protein coding
Short Description: ankyrin repeat protein
Curator Summary: A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description: ankyrin repeat protein (AKRP); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 83523 Blast hits to 28077 proteins in 1268 species: Archae - 145; Bacteria - 7202; Metazoa - 43238; Fungi - 6726; Plants - 3393; Viruses - 1185; Other Eukaryotes - 21634 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66055.2

Model type: Protein coding
Short Description: ankyrin repeat protein
Curator Summary: A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description: ankyrin repeat protein (AKRP); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66060.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2544 Blast hits to 2536 proteins in 339 species: Archae - 0; Bacteria - 388; Metazoa - 1050; Fungi - 75; Plants - 443; Viruses - 21; Other Eukaryotes - 567 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66060.2

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1).
Link: InterPro Scan - TAIR