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Mutant Lines
54-2508-1

54-2508-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 191741 [Map]; Strand: c
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1372; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1960; Region: intergenic

CAACAAATAG AATCATTCTT TACAAACAAA AAAGAGTAAA AAATAATAAT 
GATAATCGGT AGTACCAATT TATTTTGGAA ATGTACACTA GATAACCCTG 
CATTTATAAT AGATTGATAA TTGACCTTGA CCTTTAAAAC TACATTTTTG 
TTGATTACTA TTTGACCAAC ATAATTTCAC AAAAGTGCAT ACAAATATTT 
TCATCAATCC ACACGAAAAA TGACATACCC CTTTATTTCC TATTTTGCCA 
CCATAGTAAA CTACTTAATA AAGGGGTATA TGCTTTATTT AACCTAATTT 
AACCTTTATT TTGTTGTGTA TAAGTCCTAA TGTTTGTATA AACATAAGTA 
TAAATCCTTA CCTTTTGAAT AATAAGCT

3 prime edge [+] show sequence

Chromosome: 2; Position: 191854 [Map]; Strand: c
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1485; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1847; Region: intergenic

ATTTGTTGGT GCATGATATG ATTTGCGTTT ATTACGTTTC AAAAAGAATA 
GAAAATGTTT AAGACAATTG TTACATCACC CTGATTTGTG TAGTCACCAC 
CACCATATTG TGCGCGGTCG ATCAAACACC ACTTATTAAT CATTGTCTAC 
NTTCTTTTAT TGGAACATCC GAATATATAT CTGTAAAACA CACTCATCCA 
AATAAAGTTC TCCCAAACTT TATGGTTAAT GGCTTAAAAA GCAATGCTAA 
AATTAAGCCT GGACATTCGG ATTTTGGTTC GGATTTTTTC GGATTTGGAT 
AATTTCTGAT GAGGGAGTTT ATTATCCGTT TGGATGATAT GACTATTCGG 
TTCAGTTTCG GTTTGGATGA TGTCGGATTC GGATCAATTT CTGAAAAAAG 
AAACTAAAAA ATTGTTCAAT TTTTTTAAAA AAATTGTTTA ATTTTGCAAA 
ACATTGTATA ATTATAACAA ATATAACTAA TAATAATTCG GATATCAAGG 
TTATTTCTGA TATTTGTGGA TATAAATTAT AACTAAATAT AACTAATATT 
TTTATATATA TACCTTTATT TTGGATTTAG CGGATATCCG TTTGGTTTTT 
GGATAGGATC GGATTCGGTG GGAGAATT

AT2G01430.1

Model type: Protein coding
Short Description: homeobox-leucine zipper protein 17
Computational Description: homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01440.1

Model type: Protein coding
Short Description: DEAD/DEAH box RNA helicase family protein
Computational Description: DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR