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54-2532-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 405883 [Map]; Strand: c
      • AT5G02060.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 72; Region: intergenic
      • AT5G02070.1 - [+] show detail - Protein kinase family protein
        Distance: 12; Region: intergenic
    Flanking Genome Sequence: 54-2532-1 - 5-prime edge 
    GTTGCTGATG AGATTGAATA CATCATCAAT ATTCTGTCAC AAGAGGTTAC 
    TGAGACATAG CTGTCTTAGA AAATTACCAA AATGACTTGT ACCCTTGCCC 
    TGTTTCCGGT TATGGATTGG AGAAAAACAA TTCATAGAAA TGGATTTTTG 
    TAAAATCATT GAGATGGGTT TTGTTTGATA TCATATCAAG ATCCAAAACA 
    TGGTATGAGA CGATATAGCA GCTAAAAACC AATTAAAGAA AGATAAACCA 
    ACAGAAATCT GAAACCTATC GCAAGAGAGA GCGGGTTGCT GCCTGCAAAA 
    CTCAGTGTCT TTAGTGAATA AAACAGTAAC TCCTGCAGAG GAACACGCGG 
    CTGCAAGAGC GAGAAGTGCA GTGACCTGCA GAATT

AT5G02060.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G53850.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02070.1

Model type
Protein coding
Short Description
Protein kinase family protein
Computational Description
Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink).
Link
InterPro Scan - TAIR