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54-2545-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29558491 [Map]; Strand: w
      • AT1G78580.1 - [+] show detail - trehalose-6-phosphate synthase
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-2545-1 - 5-prime edge 
    TTCACCACAC AGCACACACA AACAAACTTC GCAATCACGA GAAGATGTTT 
    TTATTTTAAA AATTAGGTTT TTTTTTCTGA TTACTTCTTA GACGAGATGA 
    CGTAATCGGN GGGTCCTCGC TCCTCTCTTC CTGACCAAAC TTTTTTACTT 
    TTTTTNGTAN CCAAAGAGAA ATTTATTTAT GANACATANA AAAAAAAGTG 
    GGATTTAAGC NGAANGAAAT NGACCCCTNT NACTCGGCCG AAGCNGACGT 
    TANATTNGAC TNTGGGGAAT NCANCGTAAA ANCATCTCCC TTTNTTNTTA 
    CTNGAAAGGG AATTTTTTTT NCNGACCANT AAAAAANAAN AAGGGANTTT 
    TTNCCCCTAN CTANCCAAAA AAAAAAAAAC GGGNGTNNTN NNNAANCNNT 
    AAAAAANCCN TTGGNTNGGN NAAAAANTTT TNGGGGGCCC CNANNNGNAA 
    AAANCNGGGG NAAAAAAAAA ANANNNAANC CCCNNTTGGN NTTTNGGTTA 
    NGTTTTNNCC CCCNAANANG GGGGGGGGNA AANAAANTTT TNCNTAAGGG 
    GGGGGNNCNA ANNNNGGGGN TTTTNTAGGG GNCCCCNAAN CCCCCCAAAA 
    AAAANNNNTT NNNCCNCCCC TTTNCCCCNA AAANTTNAAA ANNNNGGGGG 
    NNANAAANAN NTTTTGNTNN GNNCCCCNNG ANAAAAANNA ATTNNNNCCC 
    CNGGNNAAAA AAAAAAAAGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29558375 [Map]; Strand: w
      • AT1G78580.1 - [+] show detail - trehalose-6-phosphate synthase
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-2545-1 - 3-prime edge 
    GTGGTGAAGG GTGATCTCTC TCTCCGCCCC GAATCTCCGG GCGATGCGAT 
    TTTTATCACT GTTGGTTTAA TAATCTACTT CACGGTGGTG TGTTTTAAAA 
    TAACTGAAAT AGCTCCGGTC GAAATTTGTA GGTTTTCGAG ATTTTTTTTT 
    TTTTNGGNGG AAAAAAAAAA ANNNNTTTNT TTNAAANCCA ANTTTTTNNN 
    NNNNNNCNTN CCNGGGNNGN AANGNCNTTN NNNCCCCNNA AANNNTCCCN 
    CCCGGGCCCN NANCCCCCCC NGGCCCTTNN ANNNNNNNCC

AT1G78580.1

Model type
Protein coding
Short Description
trehalose-6-phosphate synthase
Curator Summary
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.
Computational Description
trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink).
Link
InterPro Scan - TAIR