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54-2604-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7801887 [Map]; Strand: w
      • AT4G13420.1 - [+] show detail - high affinity K+ transporter 5
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2604-2 - 5-prime edge 
    CTGGCGGCTA CTGATTTTTT CTAAGTAGCA AGAAAATAAC TTATATTTGT 
    AACTCGACTA ATACCTCTTT CGAAAAAGAA AAAATAATAG AACTTAAGTA 
    AACAATTTTC CTAAAGATTG ACTCTTTTGA ACTCTATATA AAAATTGATC 
    ACAAAAAAAA AAAANNNACC TAANTNAAAN CCNGGTTTTT TNCCTNAAAN 
    NGNCCCAATN TNACCTTTNA AANGNNNANN NANTGGAAAA ANNATTANNG 
    ANANTTTNGG AAAANGGGNT NAAANCNANG CCNNCCCTTT TTTNNNTNNA 
    NCNGGNNCNN NGGGNTNTAA NCTNCNNCCC CNTNTTTTGG NGGNCCCCNN 
    CCNCCCNTTT TNGGGGGGGT TTTTTTTTTN GGGGGGGGGG GGNNTTGGGG 
    NNNATGGNAA AAANGGGGNN NNNNAANGNN GNTTTNAACN TTTTTTTNNC 
    CNGGGGNTTT TTNGGGGNGN ANAAAAACCC NCNTNGGGGN TAANNNNNCC 
    CCCNAAAANC CCCCCNGGNG GGGGGNAAAA AGTTTTTTAA GGGGGGGGGG 
    GCNNNTTTAA AACNCNTTTG GGNGGGGGGG GAANCTTTNA AACTTTNNNN 
    NNCNNNANCN NNTTNANGGN NNAAGGGNNN GGGGAAANTN NNNNCCNCCC 
    NAAGGGGGGA ATTTTNCNGG GGGNNNNCNN AAAAAANTTN CNAANNTTTT 
    TTNCNNGGGN NNGNGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7801771 [Map]; Strand: w
      • AT4G13420.1 - [+] show detail - high affinity K+ transporter 5
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2604-2 - 3-prime edge 
    GCCGCCAGCT TGGAAACACA TTTAGATGTC ATGAATCATG ATAATATACA 
    AAAGAGTGAA TGAAGTAGTT ATTGTAGTAA TACTAGATTG GAAAGTGTAC 
    TTATCATTCT CAACCATATG TTTGTACAAA TTATTGTGTT TATATAGTCA 
    TTAAAGTCAC ATTTCTGAAA ACTTTTTTTT GTTGTTGTTG TGGTTGAATA 
    TTTGGTTATT TATCAGAAAT CATGGGGAAA ACTATATCGA CCCGACTCTT 
    TCATCATAGA GGCCGGACAA ACTCCAACAA ATACCGGGCG TCGCTCATTG 
    GTGTGTATCT AAATCTCTCT TGTTTGATAA GAAGATGATC ATTAATATAA 
    GATTTGGTGA TCGTGAATAA TGATGTGTGA AATAGATGAG CTGGAGAACA 
    ACGATGAGTT TGGCATTTCA GAGCCTAGGA GTGGTGTNTG GAGATATCGG 
    GACATCGCCA TTATATGTGT ATGCAAGTAC TTTCACTGAT GGCATCAATG 
    ACAAAGATGA TGTCGTTGGT GTTCTCTCGC TCATAATCTA CACTATTACT 
    CTCGTAGCGC TCCTCAAATA CGTTNTCATT GTTCTTCAGG CTAACGATAA 
    CGGTGAAGGT AACCCTTTTT TGCTTTTGAT CTTTATTTGT TTGTNTATNT 
    AAATAATATA ATTCGNGTNT TAAAAGAAAA ATNAACAAAC AACCCTCACT 
    TATTT

AT4G13420.1

Model type
Protein coding
Short Description
high affinity K+ transporter 5
Curator Summary
Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.
Computational Description
high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR