Home
Mutant Lines
54-2675-1

54-2675-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 1394597 [Map]; Strand: w
  - AT4G03150.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -23; Region: promoter
Flanking Genome Sequence: 54-2675-1 - 5-prime edge
```
GTTTNANACT AACAAAATCG GTTATNCGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCGCT GCAATTGAAA TTTGAGCGAG GAAGATAAGA 
TGACGTCATA TTTTACATTA AAATAATGCT CGTGACGTGG CTATCTTATA 
CGACGACGTT TCATTGCATC ATGAACTCAA ACACTGCTTC ATGAACTCAT 
ATTGAATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 1433104 [Map]; Strand: c
- AT4G03270.1 - [+] show detail - Cyclin D6;1
  Distance: 0; Region: intron3 (CDS)

CTTCCACCTG AAAAAAATCC AATGTTCAGA CACTTATCAA CACTTTAAAA 
CACATTCACA TTATAAAGAT TCATTCTTTT TCATGAGTTT TAAGTTACCG 
GAAGATCAGA AACAGACATG TCTGGTTTCC TCATTTTTGC AGACAAAGAG 
ACACAAGAGA GAGATATGAG CTTAAGAATC CAGGGCTTTG ACTGCTGTTG 
ACAAAACAAT TTAGTCAAAA CTCAGATGAA ACAAAGGACA GATTCTGTCG 
GAAGATTCTG TTTTTACCGG CATATCTTCG CTAGACAAGA ACCTGTCTAG 
ATAATTCACA GCAAGATACG TCAGAGATGG GTCGTCGAAT TTTCTTGAAT 
ACTGCGATTG TTCAGTTACA AATTAAAATA AAGTTAAGTC TTTCGATAAC 
GATTCAGTAT TCAGAACTAA ACCCAGAAAA TAATTTTGGT TAAAAAGACC 
TGAGTGATTG AAGAAATGGC TTGGTTTCGA TTAGAGAGAA GAAAAGCAGA 
GGACTTGAGG CTATGGAAGT AATGAGAAGA AGGCATGTGT TGAAACTCGA 
CGAGGAAGAG AGAGTGTGGT AAAGTTTCAT CGTCTGTGTC GTCGTTGAAG 
TTATTGTGGA GTGAAGAATG TGAGAGAGGA TGTTCAAGAT GAAACTCCAT 
TGATTGATGA TAGACTCTTC TTAAGCT

AT4G03150.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G03270.1

Model type: Protein coding
Short Description: Cyclin D6;1
Computational Description: Cyclin D6;1 (CYCD6;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2035 Blast hits to 2034 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 1002; Fungi - 29; Plants - 874; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink).
Link: InterPro Scan - TAIR