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54-2684-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19668082 [Map]; Strand: c
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: -990; Region: promoter
    Flanking Genome Sequence: 54-2684-1 - 5-prime edge 
    CGNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTT CTTGAGTCAA GAAGGCCTCA CGTTACTCAC AGTGGCTGGA 
    TCATTTTATT ATATAATTAC TCTCTGAGTT GTATAAATCC TAATCTATAA 
    TTAACAAATG TATAGTCTAT ATATAATTTG TCTGTTCGTT CACTCAGTAT 
    CTATCGTCAA TGCCCTTACA AAAGGCAGGC ACAAAAATTA CGAACAAATC 
    AATGACCCCT CAGTGACAGA GAGACCAATC AAAATCGCTT TATTTATTTA 
    TCTGGTGAAC TCATTGTGCT CTTCATACAT AAAAAAAAAA GTTTTNTNTN 
    TTGAAAAAAA AAAAGTTNAC TACCTACACG NGGAAAACGT NTAGGGAAGT 
    CNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19668084 [Map]; Strand: c
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: -992; Region: promoter
    Flanking Genome Sequence: 54-2684-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATACT 
    GCCATGNGAA NAGAAGCCTT GAAGNCTATC ANTNATCCAN NTCATGTNAC 
    TATNTACCTN ATCAGTNGTA NTACTCANAT TATGGNNCAT GANCTGTTAT 
    CTTAGGTGAA TGATGGGTTG AATTACCAGC CCTGGGCCGT GCGACCACTC 
    GTGACCCTAT ATAAACACTA GGCGTCCTCG AGTTTTTTTC TTCCTTTTCA 
    AACCAGTTTG GTAACGTCAG ATTTAGTTGA CATATGAATG TAGTTTTATT 
    ACTTAATTTG AATTTAAATT GCATAAGGGC CAATCATGAG ATTCGTCGTA 
    TTCATTTTTG TTTTTAATTT AAATATACGA TCGATTTTGT CTATTGTGCA 
    TATTATGCAT CTGCTGGAGT CAAACTTGAC TCTTGATCGT CGGAAAGGGA 
    CTTCTCCATT TATGTATTAT AATGGACGTA AACAAAAATT GTGAGTTATC 
    GACACAACTT CAGAAACACA TCTCATTTAT GGTATATTGT GAATAAACGA 
    ATAAGTTATC CATTGGAAAA ATTAAATCAG TAGCTAGTAG AAACATATAT 
    GAAAAATATA CTGCGACAGA CAGTATATTA ACTGGGAAAG GAGAAAAACC 
    GAGAAAGAAA AGAAATTGTC AAAGGAAATC AATCGTATTT AATTAAGAAA 
    AGGAAATCTC AACTGAATCT GCCCTTTTTT GGNTAANGGG GCTTCAGATT 
    AAAAAAGAGT TATCGCTTCA TAATG

AT2G48080.1

Model type
Protein coding
Short Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Computational Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR