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54-2725-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1682435 [Map]; Strand: w
      • AT1G05630.1 - [+] show detail - Endonuclease/exonuclease/phosphatase family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G05630.2 - [+] show detail - Endonuclease/exonuclease/phosphatase family protein
        Distance: -12; Region: promoter
    Flanking Genome Sequence: 54-2725-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TTCGTCCCCA TTCCCATATT CTCTCGTTCT 
    TGAATTCCTC TGATCGTCGA TGGATTCGCT AATTATCGAA GAAGATGACG 
    AAGAGGCGTT GGCCACGCTC GTCCCTGTTC CTCCGCGGCG TAAAACGCAT 
    TCCTATAGCC TACAATTCGA TCACAAGCCT CACCATCAGA TCCGCAAACA 
    CAGCCTGGAC GAGGTTCCTA GATCCGCTAC ATTAGCATCC GAAGCCGTTT 
    ATTTCGATTC CTCCGACGAC GAATTCTCCA CCGGAGGTAA CATCACAGAA 
    AACGCCGCTG ATGAAACCAA CGCCGGAGCT GAGGAGTACA CCATCGTTAA 
    TCCTCCTCCC AATGTCGGTC TTGGGGATGA CGACACCGAG CCATTACCTG 
    AATTTATCGG CGCTGGTGGC GGTTCCGGGA TATTTAAGGT CCCGGTGCGC 
    GCGGCGGTGC ATCCCGGACG TCCGCCGNGT CTTGAGCTGA GGCCGCATCC 
    GTTGAGGGAG ACGCANACTG GGAGATTNTN GAAGAACATN GCTNGNNCNG 
    NNACNCAGNT TTGGGNTGGN CAAAAAAAAA NATNNGGGNN TNGGAANNNA 
    NANNANNCCC CCCNNGNNNN NTNNNNNANN NNNGNNCCNN CCCCCCCNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1682439 [Map]; Strand: w
      • AT1G05630.1 - [+] show detail - Endonuclease/exonuclease/phosphatase family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G05630.2 - [+] show detail - Endonuclease/exonuclease/phosphatase family protein
        Distance: -8; Region: promoter
    Flanking Genome Sequence: 54-2725-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    CGGACGAATG GTGAAGAAGA GAAAAGGGAG AGTGAGAGAG AATGATAATG 
    AGAGGAGAGC ACGTCGTGGT GGTGGGAGAG AGAGAGAGAG AAAGAGAAGA 
    GAAGAGGGAG AGAGAAATAT GAAGACGACA AGTGTACNGG AAGCGAAAGT 
    CTTGGTCTTT GTTGGTTTCC ATGAGTCTTC TTCTTCAGAG AGCTTCTCAA 
    GAGAAACAAC AACAAAAAAC GAATGTTTTT GTTTTGTGAT TCTCCAAGGA 
    AGACGCAGTT AAAGTTGAGA GAGAGAGANA CAGATAATTA TTATATATTT 
    ATACTCTCAG TCCTTGTCAC GTTCCTTTGT TTTATTTTTA TTAATTTATT 
    ATTAGGNCCT TTAGTTTTCT GATTTCTCTC GTTTTTTGTT TTTTTTTTTT 
    TTTTNGGAAT TTTTTCCCCC CCAAANNGCC NAAANNNCAA NNNCNGGGNT 
    TTTTTTTNNN NNANNGGGAN NNTTTTTTTT TCNTNGGGNG GNCNTTANAA 
    ANTTNCNNAN NGNNTTTTTT TTTTTAAAAA AANCCCTTTA AGGGTTTTTT 
    TTNTNTANAA ANCCCCCCCC CNNTAAANAA ANNANNGNGN NCCCCNTTTT 
    TTAAAAATTT TTTTTTTNCC CNGGGGGGGN NTNNATNNNA AANGNTTNAA 
    ANGGNCCCCC CNNGGNNGNN NCCCTTNNNN NNANNNNGGG GNACNNTTTT 
    TNNNCNNTTT TTTTTTTTTN NAAAN

AT1G05630.1

Model type
Protein coding
Short Description
Endonuclease/exonuclease/phosphatase family protein
Curator Summary
Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light light
Computational Description
5PTASE13; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 2865 Blast hits to 2115 proteins in 235 species: Archae - 0; Bacteria - 18; Metazoa - 1064; Fungi - 695; Plants - 755; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05630.2

Model type
Protein coding
Short Description
Endonuclease/exonuclease/phosphatase family protein
Curator Summary
Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light light
Computational Description
5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR