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54-2795-4

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26426290 [Map]; Strand: c
      • AT5G66080.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -884; Region: promoter
      • AT5G66090.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-2795-4 - 5-prime edge 
    CTGTCTGGTG CCTTCAGAAA GATAAGGATT CCGATCAATC ACCGGCAGGA 
    GAAGATGCTT CACATTACTG AATGCGTCTC CCACTCCCAC TGGACTTGGA 
    CTAGCTTCTG CTTCTTTTGC CTGCGCCTTT ACTCGACCTA AGCTAACCAC 
    AAACTAATCA TTGTTGGCTC ATCAACAAAC TAACCATATC AACAACTACT 
    CATTACGATT GTGCTAATTT GAATCACTCC CCTCTTCGTT GTCCCAAACT 
    ATATTAAAAT TCAAACTGGA AATGCGACTG TACCCAACAA AGGTAGAATT 
    GGACTATTAC GTTTAGGAGA AGCAACTCGT ATTCCAAATA AACAGAGAAA 
    AAGAAGAGAA GATACCTTTG AGAGCGACAC TGCGTAGGGA GAGAAGCTGC 
    TGGCGAGGTT TAGATCGAAG AGAAGAAAGA GGGTAGAGCG CAGAGGAAGA 
    AGAAGAAGAA GAAGGAAGTG TTGCTTGCTT GGAGGCCGCA TCGAGAACAG 
    AAACGGCGGC TATGGAGTGA GCAGATGCCA TTGAAGTTGC GACGGAGTTC 
    AGCAACTATC GCGACGATTC CAGAAAACAA TTCCAGAAAA CAAACTTTTT 
    TTTTGTTCTC TTATTTTGGT TCTGCCCACG GCTTGGACTA GAGTATCGGT 
    GAGGGGCTTG AATT

AT5G66080.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66090.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR